FMO11145.5prime Sequence
1126 bp (1012 high quality bases) assembled on 2011-12-01
> FMO11145.5prime
CAGTCGACATGCTTTCTCTGCAGAATCAACGGCAACCGAAGACCACCCCA
CTGACGGACGACTACGTGACCTCGAACACGGTTCTGGGCTACGGGATCAA
CGGGAAGGTGGTGCAGTGCACCCATCGCCGCACCCAACAGAACTATGCCC
TCAAGGTGCTGTTGGACAGTGAAAGGGCGCGTCGCGAAGTGGACCTGCAT
TGGCGGGTCAGCGGATGCCGGTACATTGTGAACATCATTGATGTGTACGA
GAACACGTTTAAGGACAGGAAGTGCCTCCTGGTGGTCATGGAGTGCATGG
AGGGCGGCGAGCTCTTCCAGAGAATTCAGGACAAGGCCGACGGTGCCTTT
ACGGAGCGGGAGGCGGCCCAGATAATGCACGAGATCTGCGCGGCCGTAGA
CTATCTGCACAGTCGCGACATAGCGCATCGCGATCTCAAGCCGGAGAACT
TGCTGTACACCACCACTCAGCCGAATGCGACCCTTAAATTGACGGACTTT
GGCTTCGCCAAGGAGACATTCACCAGTTACACGCTGCAGACGCCCTGCTA
CACTCCCTATTACGTGGCTCCTGAGGTTCTGGGCCCGGAGAAGTACGACA
AGAGCTGCGACATCTGGTCGCTGGGCGTGGTGATGTACATCATTATGTGC
GGATTCCCGCCGTTCTACAGCAACCACGGCCTAGCCATATCGCCCGGCAT
GAAAAATCGCATCCGCACCGGCCAGTATGACTTTCCCGATCCGGAGTGGA
CGAAATGTGAGCCAGGCGGCAAAGGATCTGATCAAGGGCATGCTGAACGT
GGACCCCAGCAAGCGTCTGCGCATCCAGGACGTCATTAGCAACAAGTGGA
TTGCCCAGTACAATGCTGTTCCACAGACACCGCTCTGCACGGGTCGCATG
CTAAAGGAGGCCGAGGAAACCTGGCCGGAAGTGCAGGAGGAGATGACGCG
CTCACTGGTCACCATGCGCGTAGACTACGATCAGGATGCAATCAAGGCCC
TGGAACAAGTCGAAAATCCGCTGCTGACGAAGCGCAGGAAAAGAATCGAA
GGAGATTGGAGTTTACATTGTCAATGCGACGTCGCCAACGCAAGCCTTCT
AGAAACCATTCCGTTGGGCGCGCGGT
FMO11145.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MAPk-Ak2-RF | 1913 | CG3086-RF | 26..1096 | 9..1081 | 5075 | 98.6 | Plus |
| MAPk-Ak2-RE | 2060 | CG3086-RE | 173..1243 | 9..1081 | 5075 | 98.6 | Plus |
| MAPk-Ak2-RD | 2045 | CG3086-RD | 158..1228 | 9..1081 | 5075 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5762101..5762659 | 567..9 | 2795 | 100 | Minus |
| X | 23542271 | X | 5761168..5761585 | 985..567 | 2030 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:09:21 has no hits.
FMO11145.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:18 Download gff for
FMO11145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAPk-Ak2-RD | 149..1210 | 1..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:59 Download gff for
FMO11145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAPk-Ak2-RB | 129..1190 | 1..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:10 Download gff for
FMO11145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAPk-Ak2-RD | 154..1215 | 1..1068 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:10 Download gff for
FMO11145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5761169..5761584 | 568..984 | 99 | <- | Minus |
| X | 5762101..5762663 | 1..567 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:59 Download gff for
FMO11145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5655202..5655617 | 568..984 | 99 | <- | Minus |
| arm_X | 5656134..5656696 | 1..567 | 99 | | Minus |
