FMO11148.5prime Sequence
1092 bp (975 high quality bases) assembled on 2011-12-01
> FMO11148.5prime
CAGTCGACATGCTGGCACTGCCTTTGCTGACTCTGGCGGTCCTCGCCAGC
TGCGGCTACTCCGTGGACGCCTACTCCAAGTACGGCCGTGGATGCGGGGA
CATTGGCTGCCTGCCCACCGAGGAGTGCGTCATCACCAGCGACTCGTGCA
GCTACAACCAGCGTGACGGCAAGGATTGCGGCAACTATCCCACCTGCAAA
CGGCGCTCCGGCGGAGGATCATCCGCCTCGAACAGCAGCCCCAACTTGGC
AGCCCCCTCGGCCAATCCGTCAGAGGTGAGCCATAACGCATACGCCCCGA
ATGCCCCAAGTGCCCCGAGTGCCCCGTTGCCGGAAGCGGATGCGAGCGGT
GGTGCTGGCTACGGTGGTGCTGCGGGCGGTGGTGGAAGCGGCGGATATGG
TGGTGGTTTCTCGGCTGGCGGCCACTCCCTGTACCCCAGCCTACCCAACT
CAAACGGCGGCGGCGGTGGTGCGGCTCCCTACAATCCATATGGCAGTGGT
GGCGGCAACGGTGGATACGGCGGCTACAATCCCTACAACGGCGGCTACCA
GCCACCATCTTCTGGCGGCTATCAACCTCAAGCTCCTGGCGGATACCAAC
CCAGACCGGGCTACACGCCACCCGCCCCAGGCTACGATAACAACGGTGGT
GGTGGTGCCCAGAAACCCAAGGACAAAGAGGGCGGCTTCTTCTCCAATTT
CTTCTCGAATCCGGCGGTGAGTCAAGCGGTGTCCGGTATCATTGCACGCC
AGATAGCCAAGCAACTGCAAGCGGCGGAGCCGGAGGACCAGGTGGTGGAC
AGCCGGCTGGCGGCTACCAGCCAAGCGGTGGCTATGGCGGAGACCAGCAG
CAGAGCGGCGGATCCGGTGGTAGTAACATACTTGGCGTCTCTGGATCCGT
TCTATCCGGCGCGTGTGTAATGCAGCGCTGCGCGTATGCTAGCAGCTCCT
GGGAGTCTGCTCAGCGTGAAATTCCAACGAGCGCTCAGCAAGGAGCGGAG
TCTGAGACTGGCGACTCTCAGCTCGAAAACCTGCGCCTCTCATGGAATTC
CTCATCAGGACGCCAGTCCCTTATCTCCTCGAACGAGGAACC
FMO11148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32521-RD | 1691 | CG32521-RD | 152..1263 | 9..1080 | 4525 | 96 | Plus |
CG32521-RB | 1782 | CG32521-RB | 243..1354 | 9..1080 | 4525 | 96 | Plus |
CG32521-RA | 1714 | CG32521-RA | 175..1286 | 9..1080 | 4525 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21205940..21206587 | 911..271 | 2935 | 98.3 | Minus |
X | 23542271 | X | 21211080..21211274 | 273..79 | 975 | 100 | Minus |
X | 23542271 | X | 21211687..21211756 | 78..9 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:07:55 has no hits.
FMO11148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:12 Download gff for
FMO11148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32521-RB | 239..1296 | 1..1032 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:20 Download gff for
FMO11148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32521-RA | 171..1228 | 1..1032 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:38 Download gff for
FMO11148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32521-RA | 171..1228 | 1..1032 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:38 Download gff for
FMO11148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21205796..21206584 | 274..1032 | 95 | <- | Minus |
X | 21211080..21211274 | 79..273 | 100 | <- | Minus |
X | 21211687..21211760 | 1..78 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:20 Download gff for
FMO11148.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21076823..21077611 | 274..1032 | 95 | <- | Minus |
arm_X | 21082107..21082301 | 79..273 | 100 | <- | Minus |
arm_X | 21082714..21082787 | 1..78 | 94 | | Minus |