Clone FMO11148 Report

Search the DGRC for FMO11148

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:48
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32521-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11148.5prime Sequence

1092 bp (975 high quality bases) assembled on 2011-12-01

> FMO11148.5prime
CAGTCGACATGCTGGCACTGCCTTTGCTGACTCTGGCGGTCCTCGCCAGC
TGCGGCTACTCCGTGGACGCCTACTCCAAGTACGGCCGTGGATGCGGGGA
CATTGGCTGCCTGCCCACCGAGGAGTGCGTCATCACCAGCGACTCGTGCA
GCTACAACCAGCGTGACGGCAAGGATTGCGGCAACTATCCCACCTGCAAA
CGGCGCTCCGGCGGAGGATCATCCGCCTCGAACAGCAGCCCCAACTTGGC
AGCCCCCTCGGCCAATCCGTCAGAGGTGAGCCATAACGCATACGCCCCGA
ATGCCCCAAGTGCCCCGAGTGCCCCGTTGCCGGAAGCGGATGCGAGCGGT
GGTGCTGGCTACGGTGGTGCTGCGGGCGGTGGTGGAAGCGGCGGATATGG
TGGTGGTTTCTCGGCTGGCGGCCACTCCCTGTACCCCAGCCTACCCAACT
CAAACGGCGGCGGCGGTGGTGCGGCTCCCTACAATCCATATGGCAGTGGT
GGCGGCAACGGTGGATACGGCGGCTACAATCCCTACAACGGCGGCTACCA
GCCACCATCTTCTGGCGGCTATCAACCTCAAGCTCCTGGCGGATACCAAC
CCAGACCGGGCTACACGCCACCCGCCCCAGGCTACGATAACAACGGTGGT
GGTGGTGCCCAGAAACCCAAGGACAAAGAGGGCGGCTTCTTCTCCAATTT
CTTCTCGAATCCGGCGGTGAGTCAAGCGGTGTCCGGTATCATTGCACGCC
AGATAGCCAAGCAACTGCAAGCGGCGGAGCCGGAGGACCAGGTGGTGGAC
AGCCGGCTGGCGGCTACCAGCCAAGCGGTGGCTATGGCGGAGACCAGCAG
CAGAGCGGCGGATCCGGTGGTAGTAACATACTTGGCGTCTCTGGATCCGT
TCTATCCGGCGCGTGTGTAATGCAGCGCTGCGCGTATGCTAGCAGCTCCT
GGGAGTCTGCTCAGCGTGAAATTCCAACGAGCGCTCAGCAAGGAGCGGAG
TCTGAGACTGGCGACTCTCAGCTCGAAAACCTGCGCCTCTCATGGAATTC
CTCATCAGGACGCCAGTCCCTTATCTCCTCGAACGAGGAACC

FMO11148.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG32521-RD 1691 CG32521-RD 152..1263 9..1080 4525 96 Plus
CG32521-RB 1782 CG32521-RB 243..1354 9..1080 4525 96 Plus
CG32521-RA 1714 CG32521-RA 175..1286 9..1080 4525 96 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21205940..21206587 911..271 2935 98.3 Minus
X 23542271 X 21211080..21211274 273..79 975 100 Minus
X 23542271 X 21211687..21211756 78..9 350 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:07:55 has no hits.

FMO11148.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:12 Download gff for FMO11148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32521-RB 239..1296 1..1032 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:20 Download gff for FMO11148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32521-RA 171..1228 1..1032 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:38 Download gff for FMO11148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32521-RA 171..1228 1..1032 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:38 Download gff for FMO11148.5prime
Subject Subject Range Query Range Percent Splice Strand
X 21205796..21206584 274..1032 95 <- Minus
X 21211080..21211274 79..273 100 <- Minus
X 21211687..21211760 1..78 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:20 Download gff for FMO11148.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21076823..21077611 274..1032 95 <- Minus
arm_X 21082107..21082301 79..273 100 <- Minus
arm_X 21082714..21082787 1..78 94   Minus