FMO11152.5prime Sequence
1124 bp (1014 high quality bases) assembled on 2011-12-01
> FMO11152.5prime
CAGTCGACATGACTGCCCGCATGATCCAACGCGGCCTGCACACTGCTCGC
TCCTGTCTGTTGGCGAGAGCTCCTCGTCGCGCAAATCCTGGACTAGGTTA
CCAGCTGGAGCAGCTGCAGGAGCACCCGGAAAAGAGCAGCGAAGCTAGCG
AGGATTACGCCGATCTGGAGTCGGATTTCATGGACGTGCAGAAGACCCAT
CGGCAGTACGAGAGGGAGCAGCAGCAGCATCGCGACCGCATCCGTCAGTT
TATGATAAAGCACAAGTATTTCCGAGACGCCAAGTTGCCCAATCTCTTGC
TTCATGCCGAAAAGGAGCAGATGCGCCTGCTGCACGAGCGAGATCCCGAG
GAATGGAGCGTTGAGCGATTGGCCGAAAGTTTTCCCGCCACTCCGGACAT
TGTGCAGAAAATTCTGCGGGCCAAGTGGCGACCGAGAAGTGTGCAAAGGA
TACGCTCCCACGATGAAACCGTCATTAAAAACTGGCAGCTTTTAGGGACG
GGAAAGGGTGACTTCAGTATCCCACCGTCTCTTCTCCAGCATCTGCAGAA
ATTCGCCGAGCGAAGGTGGCAGGATCTGCGGGAGCTTAAAATCCAGGATT
GGCCCACAAAATCACAACTACCGACTCCGCAAGGCAACGAATTCCGCAAA
CTGCTGGGCAGCAGTAGTAAAACAACAGAGGAGATGCCTACACCACAAAT
CCCATCCGGCTATGAAGCTCCACCCTCTGCTGCCGAAGATGAAACCTATT
TGTTGGACAAAATCCGTAATAAAAAGAAGATGCGGCTGCAGGAGCTTAAG
GAATTGCAGCTCGTTGAGTCTGCGCCCGCAGTTCCAGAGGAAATGAAGCG
GCCCATCGAGAATCCCAGTGGCACCGGGATTCCTGCCCAGTTTCGTGCCC
AAGTTTGCGAGCAGCGAGATTGTGATCAGTGCCGCGGATCAGCGCAAGTA
TGAAATAACCAGGTGAAAACACGCATTGTATCCCGGAACTGCATCGCCAG
GAGCCACTTACCGGGTGGAGATGCCTATTACGATGACGATGGAAGCCTGC
TCTAACGGATGCCTTGATTGACCGGAGCCCAGTGGTGATAGCCAAGCCTT
CCTAGAACATTTCGTTGGGCGCGC
FMO11152.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4553-RA | 1280 | CG4553-RA | 63..1149 | 9..1090 | 5095 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25475767..25476853 | 1090..9 | 4905 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:10:18 has no hits.
FMO11152.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:22 Download gff for
FMO11152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4553-RA | 56..1151 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:26 Download gff for
FMO11152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4553-RA | 56..1151 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:34 Download gff for
FMO11152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4553-RA | 56..1151 | 1..1095 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:34 Download gff for
FMO11152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25475813..25476860 | 1..1043 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:26 Download gff for
FMO11152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21301535..21302582 | 1..1043 | 98 | | Minus |
