FMO11153.5prime Sequence
962 bp (962 high quality bases) assembled on 2011-12-01
> FMO11153.5prime
CAGTCGACATGAACAAGTACGGGATGGTCGGCGTCTGCCTACTGGCTGCT
CTGGGCGCTCTGCTCCTGGAGGTCACTGCCTCTCCTTCGTCCGCCGCCTC
GTCTAAGGTGGATCCTAGCCAACTTGGCGGACTTTCAGCTCAGTTCTTGC
CACCCGAGTACCGCAACACGAACGTTAGCATCGAGGATATAAAAAGAATA
TATCGTGAAAAATGCAAGAAGGTAAATGGAGCGGACAACGCAACCTTCTA
CGAAGAAATCGAGCGGGCGGCAGCCAAGATGAGCACCTGCATCAGCGGGG
TGGTCAATCTGACGGCTCTGCAGGAGGAGATGGATGTGGCGAGGCCGAAC
GGCGACTTGGACACCGTGTTTAGCAAATACTGTCTCAAGGCACCGGAGGC
AGAGGCCTGCGTCAAGGAGTTCAACGACAAGGCGCAGCATTGCTTGACCC
CCGAGGAGAAGCGCCACCAGGAGACGGTTACCCGAATTGGAGCGTCCGTT
TTGGGATTCGCCTGTTCGCGTGGCGGCGATCAGATTGCCCTCTTCATTGC
CGAGCAGGGACCCGAGTGCCTGGAGGCCAACAAGGAAGCCATTAGCAATT
GCCTCAATCAATCCTTTCATCAGTACATTCCCAAGGATGGCCAAGTTCCG
GACCTGATGAGCCGCCCAGAGCTCCTTTTCTCACCCACCCACTGCGTGGA
CCTGCAGCGCTTCGAGGCCTGTGTCATCCATCATTTGGAGCAGTGCACGC
AGATCACCACCGCTAATATCGTTCAGTCCGTCTTCCGTTTCGTGAAGAAC
GAGACCGACTGCCAGGCTTGGATGCAGGCACGTGCGAACGAGAAGCCCAT
TCTGATGGCCACCTCCAGCAACAACACAGCCCCTGGACTCGCCTACTCCT
GGCCGGCACTCTTTTGGGCGCCACAATACTCCTGATACTCCCCCGCAAGC
TTTCTAGACCAT
FMO11153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11378-RC | 2256 | CG11378-RC | 99..1035 | 8..943 | 4645 | 99.8 | Plus |
| CG11378-RB | 1698 | CG11378-RB | 598..1534 | 8..943 | 4645 | 99.8 | Plus |
| CG11378-RA | 1199 | CG11378-RA | 99..1035 | 8..943 | 4645 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1171815..1172576 | 183..943 | 3745 | 99.7 | Plus |
| X | 23542271 | X | 1171523..1171698 | 8..183 | 880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:10:27 has no hits.
FMO11153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:22 Download gff for
FMO11153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11378-RA | 86..1035 | 1..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:31 Download gff for
FMO11153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11378-RA | 90..1039 | 1..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:38 Download gff for
FMO11153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11378-RA | 90..1039 | 1..948 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:38 Download gff for
FMO11153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1171514..1171698 | 1..183 | 97 | -> | Plus |
| X | 1171816..1172580 | 184..948 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:31 Download gff for
FMO11153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1065547..1065731 | 1..183 | 97 | -> | Plus |
| arm_X | 1065849..1066613 | 184..948 | 99 | | Plus |
