FMO11154.5prime Sequence
966 bp (966 high quality bases) assembled on 2011-12-01
> FMO11154.5prime
CAGTCGACATGCGCGTCTACCTGGCCCTGCCGCTCCTGCTGCTGGGCATC
GGCCTCAGTTTGGCCCAGTACCAGTATCAAGCGCCCCACCAAACCCTCGC
CCAGCAATTCGCCGACGTGGTGGATGTGGTCGATCCTGCAGAACAATCTA
TCAAAGCAGTGCGACCACCGAAGAGCCGCAATCAGTGCACCGCCAAGCAG
AACTGCTTCTGCGGCACTCCGAATGTCAACCGTATCGTGGGCGGCCAGCA
GGTGCGCTCCAACAAGTATCCTTGGACCGCCCAATTGGTAAAGGGTCGTC
ATTATCCCCGCCTCTTCTGCGGCGGTTCCCTAATCAATGATCGCTATGTG
CTGACCGCCGCCCATTGTGTGCATGGGAACAGGGATCAGATCACCATTCG
CCTGCTCCAGATCGACAGATCCTCCCGGGATCCCGGCATTGTGCGCAAGG
TCGTCCAGACCACTGTGCATCCTAACTACGATCCCAACCGGATTGTCAAC
GATGTGGCGCTGCTCAAGCTGGAGTCCCCTGTTCCACTGACTGGAAACAT
GCGTCCAGTCTGTCTGCCCGAGGCCAATCATAACTTTGATGGCAAGACCG
CTGTGGTTGCTGGCTGGGGTTTGATCAAGGAGGGCGGCGTCACCTCCAAC
TATCTGCAGGAGGTCAATGTGCCCGTCATCACCAACGCGCAGTGTCGCCA
GACGCGCTACAAGGACAAGATTGCCGAGGTGATGCTCTGCGCCGGATTGG
TGCAGCAGGGTGGCAAGGACGCCTGCCAGGGCGACAGTGGTGGCCCACTG
ATCGTCAACGAGGGTCGCTACAAGCTGGCCGGCGTGGTGTCCTTCGGCTA
CGGATGTGCACAGAAGAATGCGCCGGTGTCTACGCCAGGGTGAGCAAGTT
CCTGGACTGGATCCGTAGAACACCGCCGACGGCTGCTACTGCCAGAGTGC
AAGCTTTCTAGACCAT
FMO11154.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-RA | 1096 | CG3355-RA | 36..977 | 9..948 | 4660 | 99.8 | Plus |
| CG3355-RB | 1399 | CG3355-RB | 88..679 | 9..600 | 2960 | 100 | Plus |
| CG3355-RB | 1399 | CG3355-RB | 945..1295 | 600..948 | 1705 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4651765..4652157 | 208..600 | 1965 | 100 | Plus |
| 2L | 23513712 | 2L | 4652423..4652773 | 600..948 | 1655 | 99.4 | Plus |
| 2L | 23513712 | 2L | 4651490..4651688 | 9..207 | 995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:10:38 has no hits.
FMO11154.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:23 Download gff for
FMO11154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 80..1029 | 1..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:34 Download gff for
FMO11154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 28..977 | 1..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:41 Download gff for
FMO11154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 28..977 | 1..948 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:41 Download gff for
FMO11154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4651482..4651688 | 1..207 | 98 | -> | Plus |
| 2L | 4651765..4652156 | 208..599 | 100 | -> | Plus |
| 2L | 4652423..4652773 | 600..948 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:34 Download gff for
FMO11154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4651482..4651688 | 1..207 | 98 | -> | Plus |
| arm_2L | 4651765..4652156 | 208..599 | 100 | -> | Plus |
| arm_2L | 4652423..4652773 | 600..948 | 99 | | Plus |
