FMO11162.5prime Sequence
365 bp (365 high quality bases) assembled on 2011-12-01
> FMO11162.5prime
CAGTCGACATGGTCGGTCCATTCATGCAGGGCCTATTCTTGATTGGCATC
ATCTACTGGTATTCCAAGGGGATGATGTCCATGATCAACGACTACTACAG
AAGTGAGTTCCAGCGAAAGTTGCAGACGGAACCAGCAAAGACGAGGGCAG
AGACACCCATCAATGTGGACAACTTTATGGATTATGTTAGGGAGCTGGAC
ACTCCGGACGAGGTGGCTAGAATTCCGGCGGAAGGAACTGAATCTCCGCC
CATGGGAAACACCTATTGCCACATCCTTCGACGATTCTTGGAGATTACCG
GCACTCTACCACCATTCGATGTTTGCCTAGTTACGAGCAACATAAGAGCA
AGCTTTCTAGACCAT
FMO11162.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42508-RB | 1029 | CG42508-RB | 525..863 | 9..347 | 1695 | 100 | Plus |
CG42508-RA | 949 | CG42508-RA | 521..859 | 9..347 | 1695 | 100 | Plus |
Xport-RA | 949 | CG4468-RA | 521..859 | 9..347 | 1695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19914486..19914824 | 347..9 | 1695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:11:39 has no hits.
FMO11162.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:28 Download gff for
FMO11162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4468-RA | 510..860 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:00 Download gff for
FMO11162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Xport-RB | 495..845 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:04 Download gff for
FMO11162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Xport-RA | 513..863 | 1..353 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:04 Download gff for
FMO11162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19914482..19914832 | 1..353 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:00 Download gff for
FMO11162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15740204..15740554 | 1..353 | 98 | | Minus |