FMO11164.5prime Sequence
1112 bp (1015 high quality bases) assembled on 2011-12-01
> FMO11164.5prime
CAGTCGACATGTCGCGGTTGTGCACTTCTTTGGTCATCATTTTGGGTCTC
ATCCTCTCGAGCGGTGGCACTCACATATGCCTGAGCTCCAATCTGTGTGT
TCCCAGGGAAAATTGTCGTGAAGAGATGCCGTTCTTCGACTTTAGTTCCA
CCATTGAGTGCTCCGACGAAGAAGTGTGCTGTGAAAAGTCAAATGTGATA
GGCATGAGTAAGAGTCCTCCACAACATTCAGTGGACACACTTCTTAGGAC
AAGTTATCCAAATGCCCTGGATGGAAGCCCTCAGGTGTTTGGTGACCAAA
CCAAACCGAATCAATTTCCCTGGGTGACGGCTTTGTTCGCCAAGGGATCT
TATCTGGGAGGAGGATCTCTGATTACCCCAGGACTTGTACTAACCGCTGC
CCACATCCTAGCGGGATTATCCCCCAATGACATCATGGTTAGAGCTGGCG
AATGGGATCTATCCTCCAGTGAGAAACTAAATCCACCGATGGATCGTCAA
GTGATCAAGATCATGGAGCATGAGGCCTTTAACTACAGCAGCGGAGCCAA
CGACTTGGCGCTTCTCTTCTTGGATTCGCCTTTTGAGTTGAGGGCCAACA
TCCAGACCATTCGCTTACCCATTCCGGACAAGACTTTCGATCGAAGGATA
TGCACGGTCGCAGGTTGGGGAATGAGATCGTCGACCGATGTTGATATTCA
GACCATCCAGCAGAAGGTCGATTTGCCCGTTGTCGAAAGTTCCAAATGCC
AGAGGCAGCTCAGACTAACTAAAATGGGCTCGAACTACCAGCTGCCCGCC
AGTTTAATGTGTGCCGGCGGTGAGGAGGGACGGGATGTCTGTTCTCTATT
CGGAGGATTCGCCCTTTTCTGCTCCCTGGACGATGATCCCAATCGCTACG
AGCAGGCGGGCATCGTAAGCTTCGGCGTTGGATGCGGCCAGGCAAACGTT
CCGACCACTTCACCCATGTTTTCCAAGGTTCATGGAGTGGATCAATCGCA
CTTGGAGCAAGGTGCTTACGGTGCTGGAAATATGCTCTGCCATGTCCAGC
AAGCCTTTCTAGAACATTCGTTTGGCCGGGCGGGCCAAGTATGGTCTATA
TCCATATCTAAT
FMO11164.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3117-RB | 1217 | CG3117-RB | 16..1055 | 9..1046 | 4980 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2846125..2846939 | 1011..197 | 3875 | 99.1 | Minus |
| 2L | 23513712 | 2L | 2847004..2847197 | 202..9 | 955 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:11:57 has no hits.
FMO11164.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:29 Download gff for
FMO11164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3117-RB | 1..1044 | 9..1052 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:09 Download gff for
FMO11164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3117-RB | 11..1059 | 2..1052 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:14 Download gff for
FMO11164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3117-RB | 11..1059 | 2..1052 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:14 Download gff for
FMO11164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2846084..2846938 | 198..1052 | 98 | <- | Minus |
| 2L | 2847009..2847202 | 2..197 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:09 Download gff for
FMO11164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2846084..2846938 | 198..1052 | 98 | <- | Minus |
| arm_2L | 2847009..2847202 | 2..197 | 97 | | Minus |
