FMO11170.5prime Sequence
974 bp (974 high quality bases) assembled on 2011-12-01
> FMO11170.5prime
CAGTCGACATGCAGCTAATTTATCGTGAACTCGAGGAGGACATACTTCGA
CGCACTAATGCAGTCTTTCCGGTACAAAATTGCTTTGTTGAGGTCCTCCC
CGATCAGTTTATCATTCCCAGAAAGTACGTGGAGCTGGGCGAATCGATTC
GATCGCTTCCCGTTTACCAGGACGACGTATGGATGGTGTCCTATCCACGA
ACCGGATCGACGTGGGCCCAGGAGATGGTCTGGCTGCTGGGTCACCAATT
GGATTACGTGGCCGCTGAGCAAGATTTAAGATTGCGATCTCCGCTCATTG
AACTATCCGCTTTGTTTAGCATCGATCATCACGAGACGGTGGCCCAAAAG
TTTGGCAATACCGTGGATCTGGTTCGCAATCTGCCACGCCCACGTTTTGC
ACGCTCCCACCTGCCGTGGCCTTTGCTACCCGAGCAATTTGAGACGGTAA
AGCCGAGGATCGTGTATACTGCTCGAAATCCCAAGGATCTTTGCGTCTCG
TACTATCACTACTTCAAGTTGCTGCACGGCATGAATGGGGACTTTGAGCA
ATTCGTGGATCTCTTCCTGGAGGGGCACACACCGATGGGATCCTATTGGC
GGCACGTCCTGCCCTTTTGGAAACGTAGCCAGGATGATAATGTGCTGTTC
ATCAAGTACGAGGACATGGTCAAGGATCTGCCCAGTGTAGTTCGCCGCTG
TGCCAGATTCCTGGGCGTTCAAAGTCTCCTCGATGTGAGCACTTTGCAGA
AATTGTGCGATCACCTCACATTCGACAAGATGCGGGCGAACAAGGCGGTG
AATCTGGGAGAAGCTGCTCCCGGAATCATCTTCCAAGTTCATACGCAATG
GCAAGATCGGGGATTGGCGCAATCACATGGGCAATGAGATGTCGGAACGC
TTTGATGAATGGACCGAGAGACATATGCGTGCTTCTGGATTAAACTTTGA
CTACGTGCAAGCTTTCTAGACCAT
FMO11170.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
St2-RB | 1528 | CG16733-RB | 28..976 | 8..957 | 4710 | 99.8 | Plus |
St2-RA | 1137 | CG16733-RA | 28..976 | 8..957 | 4710 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9252350..9252962 | 344..957 | 3005 | 99.7 | Plus |
3R | 32079331 | 3R | 9251870..9252205 | 8..343 | 1680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:11:00 has no hits.
FMO11170.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:25 Download gff for
FMO11170.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16733-RA | 11..969 | 1..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:45 Download gff for
FMO11170.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
St2-RA | 21..976 | 1..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:52 Download gff for
FMO11170.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
St2-RA | 21..976 | 1..957 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:52 Download gff for
FMO11170.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9251863..9252205 | 1..343 | 99 | -> | Plus |
3R | 9252350..9252962 | 344..957 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:45 Download gff for
FMO11170.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5077585..5077927 | 1..343 | 99 | -> | Plus |
arm_3R | 5078072..5078684 | 344..957 | 99 | | Plus |