FMO11173.5prime Sequence
1116 bp (1010 high quality bases) assembled on 2011-12-01
> FMO11173.5prime
CAGTCGACATGGCCAACAGCAGCCGAAGTCGGGCCATTTTGAGCGTTAAT
CTCGATGCGGTCATGGCCAACGATCCGCTGAGGGAGCTCTTCGAGGCCTG
CAAAACGGGCGAGATCGCCAAGGTGAAGAAGCTAATAACGCCTCAGACCG
TGAACGCCAGGGATACGGCGGGACGCAAATCCACACCATTGCATTTCGCA
GCGGGTTATGGACGCCGGGAAGTGGTTGAATTCCTGCTGAACAGCGGCGC
CTCCATACAGGCGTGTGACGAGGGTGGGCTGCACCCGCTGCACAACTGTT
GCTCCTTTGGCCACGCCGAGGTAGTTCGATTGTTGCTGAAGGCAGGTGCC
AGTCCAAACACCACCGACAACTGGAACTACACGCCATTGCACGAGGCGGC
CAGCAAGGGCAAGGTGGATGTGTGCCTGGCTCTGTTGCAGCATGGCGCAA
ACCATACGATCCGCAACTCGGAGCAGAAGACACCACTGGAGCTGGCGGAC
GAGGCGACGCGTCCCGTATTGACCGGCGAATATCGAAAGGATGAGCTGCT
TGAAGCCGCACGCTCGGGGGCCGAGGATCGCCTGCTGGCCCTACTCACGC
CACTCAATGTCAACTGTCATGCCAGCGATGGACGACGCTCAACGCCGCTC
CATCTGGCAGCGGGCTACAATCGGATCGGCATCGTGGAAATTCTGCTGGC
CAACGGAGCGGATGTACATGCTAAGGACAAGGGCGGTCTGGTGCCGCTGC
ACAATGCCTGCTCCTACGGACACTTCGATGTGACCAAGCTGCTTATCCAG
GCGGGCGCCCATGTCAACGCCAACGATCTGTGGGCCTTTACGCCGCTCCA
CGAAGGCCGCCTCCAAAAGTCGCGTCGAGGTCTGCAGCCTGCTGCTCAGT
CGTGGAAGCGGATCCCACCCTCCTAAACTGCCACAAGCAAGTCGGCCATC
GATGCGGCGCCCAACAAGGGAGCTGAAAAAGCGAATGCCTTTGATACAAG
GTCACTGCTGCTGACGCCTGTCGAAGTGTGAATGTGTCCCGTGCAAGAAT
CTGTAATGCCAAAAATTGTTAACTTCTGCATCCATTAACAGAAACTCCGC
CTCCCACTGACGTTCA
FMO11173.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tnks-RB | 5486 | CG4719-RB | 500..1580 | 9..1085 | 4930 | 97.8 | Plus |
| Tnks-RA | 5486 | CG4719-RA | 500..1580 | 9..1085 | 4930 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25657423..25658198 | 983..204 | 3640 | 99 | Minus |
| 3R | 32079331 | 3R | 25660590..25660787 | 206..9 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:13:22 has no hits.
FMO11173.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:36 Download gff for
FMO11173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tankyrase-RA | 488..1581 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:47 Download gff for
FMO11173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tnks-RA | 493..1586 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:46 Download gff for
FMO11173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tnks-RA | 493..1586 | 1..1091 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:46 Download gff for
FMO11173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25657415..25658197 | 205..990 | 98 | <- | Minus |
| 3R | 25660592..25660792 | 1..204 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:47 Download gff for
FMO11173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21483137..21483919 | 205..990 | 98 | <- | Minus |
| arm_3R | 21486314..21486514 | 1..204 | 98 | | Minus |
