FMO11174.5prime Sequence
1152 bp (1046 high quality bases) assembled on 2011-12-01
> FMO11174.5prime
CAGTCGACATGTACATGCAGCATGAGCGACATTCCGACAGCGACCCCAAC
TCCCGCCATCAACAAACCGAGGCATCCCACATGAGAGACCACTGGAAGCC
GTCAAAATCCCAACAGTCGCAACAATCTGATCGTGTAGACCCTCATGACA
AGCCATCGCAGACGGCGGTCTCCTTTCTGCAGAAACACCACACGCCTAAG
AACCCGGAATCGAAGGCTAATCCAGATGATGGGGCGTCCTGCTCATGCAC
CGCAAAGAGGTCCAAGTCCGCCGATCCACCAGCGGTTAAAGCTCACACCT
GTGCATGCAACACCGATCCAAGTCCATGTGGACTGGGTCATCAGGAGAAA
TCCAGTTCGAGGAAGCCCTGCTCCCAGAAAACATCGGTTACGGAACCAGA
GAAGGCTTCCTCATTCAAGAGTGCTATAACAGCGTGTACCAAGGAGCTCC
TCGATCCCTGCACTTGTGGCGCCCACCCACCATACTGGGCTGGTCAAAGC
AACTTGGTAACCGGACCATCCTACAGTAGAGCAATGGACCCCTCCTCAAG
CACTCTCGCTCCCTTGCATAGACCCGGAGCATCAAAAGGCAGCTTTGGTC
GATCCAAGAGTTTGGCCAGTCTGCCTAGTAAATCTAATCCGCCAACTCAG
AGTGGCGTCACTTGGTTGTCGGCTTTAAAGGATCCGGAGAGTACATGTTG
CTCTTCCAAAGAGGACGAACGTCCTGCATGTACCTGCAACGCTACCCAGA
CTAATCAGGATCCTTCTATGAGTTCACTTCCTCAGAGCCATCCCAATTAT
CGCAGTATGACATCCAAATCAAGTAATTTCAGGGCGCCAAACCCGCGCAA
TCAACCCTCCTTTGGGCCAGGCGATGAGACCTCAGCAACCACACGATCCC
AATCGATTGTGGGTCAGTCACCTGCCTATGCGCATCGGAGCATCAACCCA
CCAAGGCCTTTGTGTCGAGCCTGCCGATCGGGATGCCCAAATGAGATCAG
ATTGCGCCATGCCCCTCCACAAGAATAAACCATCATCCGGGTTGCCCAGT
CCCCGATTGTTCAGAACTCTCAAGCGACCCAGTACCTTCTTCGGTTCTAG
AAGTGAGCGTTAGGTTCAGAGGAATTGGAACGGATGCCTCGATACCTTCC
GA
FMO11174.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pif1A-RA | 6324 | CG42599-RA | 2872..4001 | 9..1126 | 5225 | 98.2 | Plus |
Pif1A-RH | 7694 | CG42599-RH | 4242..5371 | 9..1126 | 5225 | 98.2 | Plus |
Pif1A-RG | 7761 | CG42599-RG | 4309..5438 | 9..1126 | 5225 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8776856..8777927 | 1074..9 | 4940 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:13:31 has no hits.
FMO11174.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:36 Download gff for
FMO11174.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif1B-RB | 696..1825 | 9..1126 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:53 Download gff for
FMO11174.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif1A-RG | 4309..5438 | 9..1126 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:50 Download gff for
FMO11174.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif1A-RG | 4309..5438 | 9..1126 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:50 Download gff for
FMO11174.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8776798..8777927 | 9..1126 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:53 Download gff for
FMO11174.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4602520..4603649 | 9..1126 | 98 | | Minus |