FMO11176.5prime Sequence
272 bp (272 high quality bases) assembled on 2011-12-01
> FMO11176.5prime
CAGTCGACATGAGCGATGCCTCCCTGGAACTTCCCTCTGAACTATTGAAC
AAATCTCTAGTGACGGTCACCAATATCTCAAAGTCGTTGTCTCGCCTGAT
TTTGAACTCCGCTCGCCGCTACTCCCGCTTCGTGCTCTTCTTTAAGCCAG
TTTTCGGAGATGCCCTGGTGGTCAAGGGATCTGAAGATCCCACTACAACC
ACCACAGTACGCACCACCACAACCACCGAAGAGACTGACAAGCTCAACGA
AGTCGCAAGCTTTCTAGACCAT
FMO11176.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43386-RB | 716 | CG43386-RB | 371..617 | 8..254 | 1220 | 99.6 | Plus |
CG1889-RA | 1468 | CG1889-RA | 1223..1373 | 254..104 | 740 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9966714..9966864 | 254..104 | 740 | 99.3 | Minus |
X | 23542271 | X | 9967024..9967120 | 104..8 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:13:50 has no hits.
FMO11176.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:38 Download gff for
FMO11176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15250-RA | 1..249 | 9..258 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:01 Download gff for
FMO11176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43386-RB | 371..620 | 8..258 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:57 Download gff for
FMO11176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43386-RB | 371..620 | 8..258 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:57 Download gff for
FMO11176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9966710..9966863 | 105..258 | 98 | <- | Minus |
X | 9967024..9967120 | 8..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:01 Download gff for
FMO11176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9860743..9860896 | 105..258 | 98 | <- | Minus |
arm_X | 9861057..9861153 | 8..104 | 100 | | Minus |