FMO11177.5prime Sequence
272 bp (272 high quality bases) assembled on 2011-12-01
> FMO11177.5prime
CAGTCGACATGAGATCGTTTTGTGTGTCTGTCTTATTAGTTACCCTTTTG
GGGATTGCGATGGCATATAGAGATTATTCGGAGAAGTGCTATCAATCCCC
TCGGTCTTATGGACCTTGTAATGTTAAGGCCCATGGATACACTTATGATT
CTCGTAGAAATGTATGTCGTCGAATTGTTCTTCGGTGTATGGCAAGGGGT
AACTATTTCTTTGACAAAGATTCCTGCGAATACACATGCTTAAAGCATAT
TCAGGCAAGCTTTCTAGACCAT
FMO11177.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42467-RA | 361 | CG42467-RA | 18..263 | 9..254 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3701423..3701601 | 76..254 | 895 | 100 | Plus |
2L | 23513712 | 2L | 3701307..3701373 | 9..75 | 335 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:13:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 289..328 | 57..18 | 101 | 72.5 | Minus |
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 3069..3108 | 57..18 | 101 | 72.5 | Minus |
FMO11177.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:38 Download gff for
FMO11177.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42467-RA | 1..249 | 9..255 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:04 Download gff for
FMO11177.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42467-RA | 10..263 | 1..254 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:01 Download gff for
FMO11177.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42467-RA | 10..263 | 1..254 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:01 Download gff for
FMO11177.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3701299..3701373 | 1..75 | 94 | -> | Plus |
2L | 3701423..3701601 | 76..254 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:04 Download gff for
FMO11177.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3701299..3701373 | 1..75 | 94 | -> | Plus |
arm_2L | 3701423..3701601 | 76..254 | 100 | | Plus |