FMO11178.5prime Sequence
782 bp (782 high quality bases) assembled on 2011-12-01
> FMO11178.5prime
CAGTCGACATGCAGCGCGACGAAAAGCTTTTTGAGCTGACGCTGGATACG
GTCCTTCAGCGTCTGAACGACCTGAAGCTGGCGGTTCTCTCGATGATCCA
AAAACTTGAGCTAGAGTACGAGACCATCAACTGGCCGACTTTCCTGGACA
ACTTTGCCATTATCTCAAGTCACTTGACGGGATTGACGAAAATCTTGGCA
AAGGAGCAGTGTCCGCCGCTAAGAAATCGAACGGTCCTGCCCCTTCTGGT
CTCCATGGACCGGGATGACACCCTCATCAACATCACAGAGGGTCGGGTGC
CAGTCTTTTCACACGACATTGTTCCAGACTATTTGAGAACTCGGCCGGAT
CCGATTACGGAACAGAAAATGCTGCAGAACGAACAGAAGGCGGCGAACCT
CACCAACGACGCTGCCATGAAACAGGTCACTCAATACAACAAGGTCGTCT
CCCACGTCCTGGATATGGTCAGCAAAGCGCGCGAGGAGTGGGAAATCGAG
AGCTCTTCGCGCACCGGCATCCAGCAGACGAGTAGCATGGCCGACACACA
GCTCCTGGTGGCCGCCGTGGGTATGGGAAAAGGACTCAAGCTGACCAACT
ATGGACCCGGACCTGGCATGATGGTACCGCCTTCAATTCGAGCACCCTCG
CCAATGGGTGGACCCGCTATGAGTCCCGGCAACGTGCAGCAGCAGCTGGG
AAAGGCGCCATCGGCTGTGAAAACAAACATCAAGTCCGCAAATCAAGTGC
ATCCGTTCTCTCGAGCAAGCTTTCTAGACCAT
FMO11178.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED8-RA | 963 | CG13867-RA | 85..840 | 9..764 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20325967..20326722 | 764..9 | 3780 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:14:08 has no hits.
FMO11178.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:39 Download gff for
FMO11178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED8-RA | 85..843 | 9..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:08 Download gff for
FMO11178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED8-RA | 85..843 | 9..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:05 Download gff for
FMO11178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED8-RA | 85..843 | 9..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:05 Download gff for
FMO11178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20325963..20326722 | 9..768 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:08 Download gff for
FMO11178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16213468..16214227 | 9..768 | 99 | | Minus |
