Clone FMO11179 Report

Search the DGRC for FMO11179

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:79
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14423-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11179.5prime Sequence

939 bp (939 high quality bases) assembled on 2011-12-01

> FMO11179.5prime
CAGTCGACATGAAGTTGTACGCCATCGTTATCCTTTCGGCATGCTGTCTT
CTAGCCGCACAAGCGGCACCCGAGAAGAAGATGGCCCTGAAGTCGCGTCA
AGTCGACCAGGATGCCAAGGTGGGCCAGGCCGCTTCCAGTGCTGGTGCAT
CGACCTCTGCCAAGGATCCCTCCAGTGGCAGGCTGTTTCTCAAAAAGTTC
CTAACCTTCAAGAACCTGTTTAGCAGCAACAATCAACCCGTGATTCCGAT
CATTATCACCGGCGCCGGAACCGGGACTAGCACAGGAGCCTCACCCACTT
CGCCCACGGTGACAGTGACCTCGACAGGCACCATTCCCTCGGCCACTGGC
ACCATTACCACTTCGCCCACAACACCCACCTCGACGACATCGAGCGCACG
GCAAACGATTATCAAGGGTGCCCGATATGGCAGCAACGATGACGACCAGG
AGCAGAATCAGGAACAGGATCAGGATCAGGACCAAGAACAGGACCAGGAG
CTGGCCCAACCCGCACAGGCCTACCCCGCCGAGTTGATGGACGAGCAGGC
TCTGCAGGCCGCCCTGGCCGCTGGCGCCCAGGAATACGAGGTGGTCACCA
CTGAGCACGAGGTCCAGGGAACTGGCGGAGCCACCGTCGAAGGCGGCAAG
GCCACCCAAAGCAATAACCATATCAGTCTGCGACGCAAAGGCGCCCGCCG
CGGCCAGGTGATCAGCGTTCGCATCCCACCCCGCTACCGCCGCTACTTCA
AGAACGGCCAGAAGGTGATGCTCAATACCGGTAGTCGTCCCGTCTCCAAG
CGTCGCGTGGTTCGCAAGCGAGTGCCTGCCAAGAAAATCAACAAGAACAA
CCGGAGGCGCAACGGCAACAAGAAGAATCGTCGCATCGCAACAAGAACCG
TCGCAATCGCATCACGCCGTCGCAAGCTTTCTAGACCAT

FMO11179.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14423-RA 1187 CG14423-RA 128..1044 7..921 4520 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2945530..2946439 7..915 4485 99.8 Plus
Blast to na_te.dros performed on 2014-11-27 00:14:17 has no hits.

FMO11179.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:40 Download gff for FMO11179.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 122..1048 1..926 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:13 Download gff for FMO11179.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 122..1048 1..926 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:07 Download gff for FMO11179.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 122..1048 1..926 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:07 Download gff for FMO11179.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2945524..2946450 1..926 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:13 Download gff for FMO11179.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2839557..2840483 1..926 99   Plus