FMO11183.5prime Sequence
1104 bp (980 high quality bases) assembled on 2011-12-01
> FMO11183.5prime
CAGTCGACATGGCGATCCTGCTCGGTTTGGTGGTCGGTGTCCTTACGCTC
GTCGCTTGGTGGGTGCTCCAGAACTACACCTACTGGAAACGGCGAGGAAT
TCCCCATGATCCACCCAATATTCCGCTCGGCAATACCGGCGAACTTTGGA
GAACAATGCCGCTGGCCGGCATCCTCAAGCGAACATATCTGAAATTCAGG
AAACAGACCGACGGACCTTTTGCGGGCTTCTACCTCTATGCTATGAAGTA
CATTGTCATCACGGACGTGGATTTTGTAAAAACCGTGCTAATTCGCGACT
TCGATAAGTTTCACGATCGCGGAGTGTATCACAACGAAAAGGATGATCCG
CTGACCAATAACCTGGCAACCATCGAGGGTCAAAAGTGGAAAAATCTGCG
ACAGAAGCTGACCCACACATTTACGTCAGCCAAAATGAAGAGCATGTTTT
CCACGGTCTTAAACGTGGGCGATGAGATGATTCGCGTGGTCGATGAAAAG
ATCTCCAGTTCTTCGCAGACCCTGGAAGTCACCGACATTGTGTCACGCTT
CACATCCGACGTAATTGGAATCTGTGCTTTTGGCCTGAAATGCAATAGTC
TGCGGGATCCTAAGGCGGAGTTCGTCCAAATGGGCTACTCAGCGCTAAGA
GAACGTCGTCATGGTTGGCTGGTAGATCTACTAATCTTCGGGATGCCTAA
ACTGGCCGTGAAACTGGGTTTCCAGTTCTTGCTTCCCTCGGTGCAGAAGT
TCTATATGAAAATCGTGCAGACACCATAGATTACAGGATGAAGAGAAAGG
TGACTCGGAACGATTTCATGGACACGTTGATTGACATGAAACAGCAGTAT
GATAAGGCGACAGGGAAATGGACTTGCCTTCAATGAGTCGCTGCCCAGCC
TTCGTATTTTTTCCTAGCTGGTTTGAGCCGGGATCCCAACCCATGGGATT
CCCACTTTATGAGCTGGCCTGCAATCAGATGTTCAGGAACAGTTGAGGGC
TGAAATCGACAGGTGTGCTGGAAAGGTACATGTAACCTGGATACGAATCT
TATTCCCGACTTGTTTTAATGGAACGTATCCATGAATCCTTAGAACAATC
CATG
FMO11183.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a19-RB | 1903 | CG10243-RB | 15..1088 | 9..1074 | 4840 | 97.6 | Plus |
| Cyp6a19-RA | 1694 | CG10243-RA | 15..1088 | 9..1074 | 4840 | 97.6 | Plus |
| Cyp6a20-RB | 1801 | CG10245-RB | 287..480 | 282..475 | 310 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14877800..14878826 | 9..1030 | 4575 | 98.3 | Plus |
| 2R | 25286936 | 2R | 14882404..14882597 | 282..475 | 310 | 77.3 | Plus |
| 2R | 25286936 | 2R | 14874336..14874414 | 371..449 | 185 | 82.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:13:02 has no hits.
FMO11183.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:34 Download gff for
FMO11183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a19-RA | 4..1062 | 1..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:39 Download gff for
FMO11183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a19-RA | 6..1064 | 1..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:38 Download gff for
FMO11183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a19-RA | 6..1064 | 1..1050 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:38 Download gff for
FMO11183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14877791..14878826 | 1..1030 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:39 Download gff for
FMO11183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10765296..10766331 | 1..1030 | 98 | == | Plus |
