Clone FMO11184 Report

Search the DGRC for FMO11184

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:111
Well:84
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9759-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11184.5prime Sequence

362 bp (362 high quality bases) assembled on 2011-12-01

> FMO11184.5prime
CAGTCGACATGCGTATTTACCACCTGAATCTATTAGTGCTAAGTGCCGGC
CTACTGGTCCTGCTGGCCCAGTCGGGGACCACGGCCCCCCAGGCGGATGA
GGATGTACAGCAACTGACTCTGGCGGATGTAAATCAGGCGGAGGAGCAGC
AGGAGATGCCGGCTGTTCGCCTGGCCAGACAATTTGGATTCGGCCGTGAA
GGATTCGGCAGAGGACGCGGCGGATTCGGCGGATTTGGCGGAAGGCGAGG
CGGCGGTGGATTCCGGAGACCCGGTTTCGGTGGCGGTGGATTCGGCGGAT
TCTACCCACCGCCACCGCCCTTCTTCGGCGGCCCCTTTTACGGCGCAAGC
TTTCTAGACCAT

FMO11184.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG9759-RB 1122 CG9759-RB 49..384 9..344 1680 100 Plus
CG9759-RC 1877 CG9759-RC 49..384 9..344 1680 100 Plus
CG9759-RA 494 CG9759-RA 49..384 9..344 1680 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13608863..13609198 344..9 1680 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:13:13 has no hits.

FMO11184.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:35 Download gff for FMO11184.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 49..384 9..344 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:41 Download gff for FMO11184.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 49..384 9..344 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:42 Download gff for FMO11184.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 49..384 9..344 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:42 Download gff for FMO11184.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13608863..13609198 9..344 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:41 Download gff for FMO11184.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9434585..9434920 9..344 100   Minus