FMO11191.5prime Sequence
1139 bp (1050 high quality bases) assembled on 2011-12-01
> FMO11191.5prime
CAGTCGACATGAGTGCCGAAAAATGGGAAAAGAACGAGGAAATTCGAATA
TTCCGGGAGTATTTGCGAATTCCATCTGTACACCCTAATATTGATTATAC
TGCTTGTGTGGAGTTTATTAAGCGGCAGGCAGATTCCCTCAATCTGCCCG
TGGAAGTAGTTTTTCCAGCTGTTAAATCAAAACCTGTGGTGATCATTAAA
TGGGAAGGAAGCCAGCCAAAGTTGCCCTCAATCATTTTAAGCTCGCACAT
GGACGTGGTTCCTGTATTCCCGGAAATGTGGACCCATGAACCCTTCTCCG
CCGACATCGACGAGGAGGGTAGGATCTTTGCACGAGGTGCTCAGGACATG
AAATCGGTGGGCACTCAGTATCTAGGAGCTATACGCCTGCTGAGGGCTGA
TGGCTTTCAGCCGAAAAGGACGCTCTATGTAACCTTTGTTCCTGACGAGG
AGATTGGAGGCATCCATGGCATGGCAGCGTTCGTTGAAACTGACTTTTAC
AAACAAATGAATGTGGGATTCAGCTTGGACGAGGGTGGAACTAGTGCTTC
TGATGTTCATCACTTGTTCTACGCCGAGCGTATACGATGGATTCTCAAAT
TGAAAGTTGCTGGAACCGCCGGTCATGGTTCTCTATTGTTGCCCGATACA
GCCGGAGTTAAGTTGAACTATGTGTTGAACAAGCTGACGGAGTTCCGTGA
ATCGCAAATCCAGCGACTGAAAAACGACAAAAGCCTGAGCATCGGGGATG
TGACCACGGTGAATCTCACCCAGTTGAGTGGCGGAGTGCAGAGCAATGTG
GTTCCACCGCTTTTTGAGGCCATTTTCGACATACGTCTAGCCATAACCCT
GGATTTGGTTGCATTTGAGCGGGAAATTCGAAATTGGTGCGAGGAGGCAG
TGGAGGCATTGACATCGAGTTCCCACTGAAAGAGCCTATGTGCGGCCACA
GGCTGGATGATTCAACCCCTATTGTTAGCTTGAAGTCGCTCTGGATGACT
GGGTCTAAAGTTAAGCCGATAGTGTGTTTGCAGTCACGATTGTCGTTTTA
TCGCAGCAGAACCAAGCAAATGTTTCTCACCCATCTAAAACCTACGTACT
ATTCCTGGACTGATGATTCAAGCCTGATGATATTTGAAT
FMO11191.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:15:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6738-RA | 1291 | CG6738-RA | 42..1158 | 9..1105 | 5020 | 97.8 | Plus |
| CG6733-RA | 1291 | CG6733-RA | 26..946 | 3..922 | 1400 | 77.3 | Plus |
| CG17109-RB | 1373 | CG17109-RB | 44..949 | 9..916 | 850 | 73.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:15:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23099719..23100210 | 100..591 | 2460 | 100 | Plus |
| 3R | 32079331 | 3R | 23100264..23100645 | 592..969 | 1695 | 98.7 | Plus |
| 3R | 32079331 | 3R | 23097907..23098397 | 100..590 | 820 | 77.8 | Plus |
| 3R | 32079331 | 3R | 23099574..23099664 | 9..99 | 455 | 100 | Plus |
| 3R | 32079331 | 3R | 23098460..23098764 | 594..898 | 430 | 76.1 | Plus |
| 3R | 32079331 | 3R | 23095963..23096326 | 183..546 | 425 | 74.5 | Plus |
| 3R | 32079331 | 3R | 23096451..23096740 | 611..900 | 415 | 76.2 | Plus |
| 3R | 32079331 | 3R | 23092179..23092417 | 223..461 | 205 | 72.4 | Plus |
| 3R | 32079331 | 3R | 23092756..23092814 | 747..805 | 205 | 89.8 | Plus |
| 3R | 32079331 | 3R | 23093972..23094091 | 242..361 | 195 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:15:51 has no hits.
FMO11191.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:57:46 Download gff for
FMO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6738-RA | 39..1155 | 9..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:16:13 Download gff for
FMO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6738-RA | 42..1158 | 9..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:43 Download gff for
FMO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6738-RA | 42..1158 | 9..1105 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:43 Download gff for
FMO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23099574..23099664 | 9..99 | 100 | -> | Plus |
| 3R | 23099719..23100210 | 100..591 | 100 | -> | Plus |
| 3R | 23100264..23100681 | 592..1000 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:16:13 Download gff for
FMO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18925296..18925386 | 9..99 | 100 | -> | Plus |
| arm_3R | 18925441..18925932 | 100..591 | 100 | -> | Plus |
| arm_3R | 18925986..18926403 | 592..1000 | 97 | -> | Plus |
