FMO11196.5prime Sequence
1123 bp (1003 high quality bases) assembled on 2011-12-01
> FMO11196.5prime
CAGTCGACATGGTCAACGTCACGGAAGACGTCTTCGCCAACGGAGCGGTG
AATCCGTTCACCAAGTCAAAGGACACCATCAAGCGGTTCACCCTGACAAA
TGGAGCTGGAATGTCCGTGCAATTGATCACCCGTGGAGCCACCATTACCA
GCATAAAGACGCCTGATGCCAGCGGTCAAATAGATGACGTGACCCTCGGA
TTTGACGATTTGGCGGGCTATCAGAGCGAGAGAAATCCGTATTTTGGAGC
AACCATTGGGCGGGTTTGCAACCGGATTGCCAATGGCAGCTTTTATCTTG
ATGGAAAGCTAGTTCAGGTGTCTAAGAACCGAGACAACAAGTTTCAGCTC
CATGGCGGCTTTGTAGGCTTCGATAAGGCTCACTGGGAAGTTGTGGAAGT
GCGTGTGGATGGTGTTACCCTGTCCCACACCAATCCCGATGGACACGAAG
GCTATCCCGGCAAGGTGACAGCCACGGCAAGCTTTACCCTCAGCGAGGAT
AACTGCCTCCATGTCCAGATGAGTGCACTAGCAGATAAAACCACTCCCGT
GAATCTCACCAACCACTCCTATTTCAACCTAGCTGGCCACAAAATCTGGA
GCCAACGGTCTCTACGAGCACACCATCGAGATAAATGCTTATGGAATCAC
TGAGACGGATCAGTCTTCCATTCCCACCGGCCGTATCACACCCGTAGAGG
GAACAGGATTTGATTTACGTGTGTCCAGCAATCTGGGTGAACGCCTCAAG
GCGCTGCAGCCAGCTCGCGGCTACGATGACAACTTCTGTGTGACCTTCAG
TCCACCACAACCATTGGCCAAGTGGCCAGAGCCACTCATCCGCCCAGCGG
ACGCTGGCTGGAGTGGTTCAGCAATCAGCCCGGAGTGCAGTTCTACACCT
CCAACTTTATGCCAGACGTGGAACGCGTTGAATCGCCCATTCCCGGCAAG
GATGGAGCTGCTATGCCAGCATTGTGCTTCTGCCTGAGAACACAAAAAGT
TTCCGACTCGGTGAACACAGCACTTCCTCGACATTTGGGACTGCGAAAGT
ACAGCACGAGTCATCTACAAGTCGGAGTTCTCAGCAAGCTTCTAGACAAT
CGTTGGCCGCGTCAGTATGGCTA
FMO11196.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10467-RA | 1544 | CG10467-RA | 353..1438 | 9..1079 | 4840 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6093385..6094395 | 1016..9 | 4645 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:02:02 has no hits.
FMO11196.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 08:56:44 Download gff for
FMO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10467-RA | 342..1432 | 9..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:34 Download gff for
FMO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10467-RA | 353..1443 | 9..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:19 Download gff for
FMO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10467-RA | 353..1443 | 9..1083 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:19 Download gff for
FMO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6093305..6094395 | 9..1083 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:34 Download gff for
FMO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6086405..6087495 | 9..1083 | 97 | | Minus |
