FMO11203.5prime Sequence
1151 bp (1030 high quality bases) assembled on 2011-12-02
> FMO11203.5prime
CAGTCGACATGTCAGCAGCTTTAGTACAGAAGGCGACGGAAACTCAACTC
GATCAGACACCGGAAGTGGGTGTGGCACAGTTGGCAACTATATCGTTGCT
ACTGCAGTACGACATTGACAACACACTGAATGCGCTCAAGGAGCACAAGA
AGATGACGCTGGACGCTCGATTGGGCGGCGAGGTGGCCGCCGCAGTCAAC
AACAACCAGGACAAGGACATAAACCGCAATCTGCCGGAGCAGACCGAACT
GGAGGAGGATCTGCGACTCAAGAGCGGCGAGAACGGCTTCATGCCGCCCA
CTCCGCCGGCGACGCCCAACCTGCAGAGCACTGCCCAGAAGCGCTGGAAG
ATCCTGGCCAAGGTGCTGCGCAAGGATTCCGAGGAGACGGTGTCCTCGTC
CAGCGATGAGTTCGCCGAGGAGCAAACTGCATCCGTGCGGCGCTTCAAGA
GCTTCGATCTGCTCCGCCAGGACAGCTTCGAGGATCACGTGAGTCTGAAG
TGCTTGGGCAAGACGGAGAACTGGTACAAATACCGCATGCAGCTGGAGAA
CGAGTCGGAGTACTCGGTGAACATCCACCACATGGAGCGTCAGCTGACCG
CAAGTGATCTGATGGGCTTCAATAACACGGGCAACATATGCGTTTGGCCC
TCGGAGGAGGCTTTGACCGCGCTGGTCCTCTCGGAGGTGGCTTCATATCG
AGGCAAGTGGATCCTGGAACTCGGTGGCGGGTTCACCTCCCTGGCTGGCC
TCATGCTGGCCAAGTATGCCACTCCGTATGCCGTTCACCTGACCGATGGC
AATGAGATATCGGTGGAGAACGTGAGGAAAACCGTTTGCCTCAACGAGCT
GAGCTGCTATACCAAGTGCTCGGTTCTGAAATGGCAGGAAAGTCTGCCCG
ATCGCAGCAGAGCAAGCCCAGTTCGACTTCATCCTCTGCGCGACTGCCTG
TTCTTCGACGAGCCCGATCCGCCCTGTGTGACACATCTGGTACTATCTGG
CGCCCGAGGGATCGGCCTGAATTATGGCTCCACGTCCGGGCGCCACCCTT
GAACGGTTTTCAGACGAGTGCTGGCCAAGGCCTTTCGCGGTGATTGGCAC
TCGCTAAACGGAACATCCGCACGCAATCTCAAGCTGAAGCGACTCCGCCC
C
FMO11203.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10947-RD | 2767 | CG10947-RD | 529..1684 | 9..1150 | 5040 | 96.9 | Plus |
| CG10947-RC | 1727 | CG10947-RC | 253..1408 | 9..1150 | 5040 | 96.9 | Plus |
| CG10947-RB | 2605 | CG10947-RB | 367..1522 | 9..1150 | 5040 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20386499..20387531 | 1036..9 | 4795 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:17:58 has no hits.
FMO11203.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:30 Download gff for
FMO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10947-RC | 244..1332 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:34 Download gff for
FMO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10947-RB | 360..1448 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:28 Download gff for
FMO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10947-RB | 360..1448 | 1..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:28 Download gff for
FMO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20386450..20387537 | 1..1084 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:34 Download gff for
FMO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20386450..20387537 | 1..1084 | 97 | | Minus |
