FMO11207.5prime Sequence
950 bp (950 high quality bases) assembled on 2011-12-02
> FMO11207.5prime
CAGTCGACATGTGCTGGGTCGCAATGGCGCGCAAGGACGATCCCGTTTTC
AATGTGCGGTTCGTGCAGTTCGTGGAGAATCAGCCGTGCCTGTGGAACTA
CACGCATCCGGGCTACAGCAAGAAGGAGGATGTGCAGAGGGCGTGGCAGC
AGGTTGCCAACGATATCAAGGACACGGTTCGCAACTGTCGCGAGCGATGG
CGCACCATAAGGAGCAGCTTCCTGCGATCCCTGAAGCTGGCACGCACACA
AACGGGACGCGGCAAGCGCAAATACTACCTATCGAAGTATCTTCAGTTTC
TCGTTCCGTTCACCAAGTCGCGATCCTGCCACAAGCAGCTGCCGGGCATG
GTGCTCCGCAAACCCGGCCAAGCTGCCACTGCTCAGCAGGAAGATGAGGT
GGTGGCGGCGGAGGAGGAGGCCAAGGTGAGCGATGGTGAGATGCCGCTGG
ACGTTCAGGTGTCCGAGGAGGAGCATCGTCGTAATCAGGAACAGGATCGG
GAGCAACCCACCGCCTGTTTGCCGCTCCGCCTGCATTCCATCAAAGTGGA
GCACGATTCGTCAAATGCGAACCAGCAGCTGGAGCGGATGGTGAGCCAGC
AGTCGCTGGTCTCGGTGCCCGCCGCCGCGCTGGGCAATCACCTGGGCTGG
TCGGATCTGACGCAGTGGTTCAAGGGACATGGCAGCGGTCATCACAAGTT
AAACCACAACAACAACAACACCAACATCACCACCACCGCCGCCGCAGCCG
GCTACGTCAGCTCTAAGTGTTTTCACTGGCGGACCAGGAGGAAGTGGCTC
ACAACCGGATGCCGACTACTCCTTTCTGATCAGCCTGCATCCGTACATCA
AGGAGATGAACGGCAAGCAGAATCGAAAAGTTTCGACAGACGTCGTCTGA
CTCATCGACGATATTCTGGATAACAGGATGTCGCAAGCTTTCTAGACCCA
FMO11207.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:18:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4404-RA | 1696 | CG4404-RA | 237..1161 | 8..932 | 4490 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12904288..12905035 | 925..177 | 3555 | 99.2 | Minus |
X | 23542271 | X | 12905613..12905782 | 177..8 | 850 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:18:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2367..2421 | 683..737 | 121 | 73.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2379 | 669..748 | 114 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1521..1575 | 707..761 | 112 | 71.4 | Plus |
FMO11207.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:32 Download gff for
FMO11207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4404-RA | 248..1184 | 1..941 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:54 Download gff for
FMO11207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4404-RA | 231..1167 | 1..941 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:42 Download gff for
FMO11207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4404-RA | 231..1167 | 1..941 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:42 Download gff for
FMO11207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12904274..12905034 | 178..941 | 98 | <- | Minus |
X | 12905613..12905788 | 1..177 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:54 Download gff for
FMO11207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 12798307..12799067 | 178..941 | 98 | <- | Minus |
arm_X | 12799646..12799821 | 1..177 | 98 | | Minus |