FMO11212.5prime Sequence
767 bp (767 high quality bases) assembled on 2011-12-02
> FMO11212.5prime
CAGTCGACATGTCTCTGACTATTACTTCCAGTGTCACTCATCCTGAGCTC
AAGGATCTGAGCACCGTTCGCAATGAACAAAAGGAACTGAACATTTCGCC
GGTTCACGATGTGAATGTCACAAAAGCCACGGCCACTTTCGGCATGGGTT
GCTTTTGGGGCGCAGAATCCCTGTATGGAGCCACCCGTGGAGTTTTGAGA
ACCACCGTGGGCTACGCCGGAGGCAGCTCGGATTTGCCAACGTACCGTAA
AATGGGCGATCATACGGAGGTGCTGGAAATCGACTATGATCCCACGGTCA
TTAGCTTTAAGGAGCTGCTGGATCTGTTCTGGAACAACCATGAGTATGGC
CTGACCACGCCCATCAAGAGGCAGTACTTTTTTCTTGATTCTGTACCACG
ATGAGGAGCAGAAGCAGGTGGCACACGCCTCCAAATTGGAGGAGCAATAG
CGCCGTGCACCGGAGATCATAACCACTGAGATTGCATCCAAGGAGAACTT
TTACCCAGCCGAGGCGTACCACCAGAAGTATAGGTTGCAGGGCCACAAGG
ATCTCGCCTCATCGCTAAATCTCAGCCCCAAACTGCTGCAGACCAGCTAT
GTGGCCACCAAACTGAAATGGCTACCTGGCCGGAGTCGGCGGCATCGAGC
AGTTTAAAGGCGGAGGCGGAGACCATGGGTCTGACGCCCACCCAGCGGCA
GTACTGCTACTACCACGTGGAGCAGAACGAGGGCCAGGGTCTCTACTGCG
CAAGCTTTCTAGACCAT
FMO11212.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eip71CD-RG | 980 | CG7266-RG | 67..805 | 8..749 | 3545 | 98.8 | Plus |
Eip71CD-RA | 980 | CG7266-RA | 67..805 | 8..749 | 3545 | 98.8 | Plus |
Eip71CD-RB | 968 | CG7266-RB | 67..793 | 8..749 | 3355 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15512476..15512739 | 254..518 | 1200 | 97.7 | Plus |
3L | 28110227 | 3L | 15512796..15513027 | 516..749 | 1070 | 99.1 | Plus |
3L | 28110227 | 3L | 15512171..15512366 | 59..254 | 965 | 99.5 | Plus |
3L | 28110227 | 3L | 15511118..15511169 | 8..59 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:17:29 has no hits.
FMO11212.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:28 Download gff for
FMO11212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eip71CD-RA | 66..804 | 8..749 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:18 Download gff for
FMO11212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eip71CD-RA | 67..805 | 8..749 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:18 Download gff for
FMO11212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eip71CD-RA | 67..805 | 8..749 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:18 Download gff for
FMO11212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15512476..15512736 | 254..515 | 97 | -> | Plus |
3L | 15512796..15513027 | 516..749 | 99 | | Plus |
3L | 15511118..15511169 | 8..59 | 100 | -> | Plus |
3L | 15512172..15512365 | 60..253 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:18 Download gff for
FMO11212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15504218..15504269 | 8..59 | 100 | -> | Plus |
arm_3L | 15505272..15505465 | 60..253 | 99 | -> | Plus |
arm_3L | 15505576..15505836 | 254..515 | 97 | -> | Plus |
arm_3L | 15505896..15506127 | 516..749 | 99 | | Plus |