FMO11213.5prime Sequence
644 bp (644 high quality bases) assembled on 2011-12-02
> FMO11213.5prime
CAGTCGACATGATGCACTACCGCAAGGCCGAGAATGTGGAGAAGGAGCTG
AGCAAGAGCGATCTGCCATTCGAGGACTGCATGCCAAAGTCCCAAAAGGA
TTTTTTGTGGATGCATGTAAAAGGCGGTACCAAAGTGAGCAATGTGATTG
AGTTTGCTCAGGAGGCGCTGAACAAGGGCGAGCACAGATGCGTGGTGTGG
AGCGGATCCGGCGGAGGAGTGGTGAAGACCATATCCTGTGCCGAGGTCCT
CAAGCGGAGCCACCCCCTCTACCAGGTGACGCGCATGGCCTACACCAGTG
TGGAGGAGCACTGGAAGCCGCAAATGGAAGGCCTGGAGGAGATTATAGTC
ACACGCCAAATACCCACCCTGCACATCCTCATGAGTCTGGACGAGCTGCC
GGATACTATAGATGGCTTACAAAAGCCAAATACGTCCACTGATTTTTGGG
ATGGCGGAGGAGCACAGCAACAGCCACATCCACGTTCCCAGCCCCGCCAT
CAGCAGCAGCCACATAAACCAGGGGCTGGGCGTGGGGGTCGGCCGAACAA
ACGGACCAGACCCGGACGCAATAAACCAGGCCAACAACCCGAAAAACCTG
CCGCTGAAGAGAATTTACCCGCCAGTGCAAGCTTTCTAGACCAT
FMO11213.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9422-RD | 1310 | CG9422-RD | 606..1223 | 9..626 | 3090 | 100 | Plus |
CG9422-RC | 1388 | CG9422-RC | 112..729 | 9..626 | 3090 | 100 | Plus |
CG9422-RA | 816 | CG9422-RA | 112..729 | 9..626 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6692292..6692503 | 415..626 | 1060 | 100 | Plus |
2R | 25286936 | 2R | 6691882..6692063 | 117..298 | 910 | 100 | Plus |
2R | 25286936 | 2R | 6692118..6692236 | 297..415 | 595 | 100 | Plus |
2R | 25286936 | 2R | 6691718..6691827 | 9..118 | 550 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:19:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2455..2512 | 458..514 | 116 | 69 | Plus |
FMO11213.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:36 Download gff for
FMO11213.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9422-RC | 72..696 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:20 Download gff for
FMO11213.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9422-RA | 105..729 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:04 Download gff for
FMO11213.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9422-RA | 105..729 | 1..626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:04 Download gff for
FMO11213.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6691711..6691825 | 1..116 | 96 | -> | Plus |
2R | 6691882..6692063 | 117..298 | 100 | -> | Plus |
2R | 6692120..6692236 | 299..415 | 100 | -> | Plus |
2R | 6692293..6692503 | 416..626 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:20 Download gff for
FMO11213.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2579216..2579330 | 1..116 | 96 | -> | Plus |
arm_2R | 2579387..2579568 | 117..298 | 100 | -> | Plus |
arm_2R | 2579625..2579741 | 299..415 | 100 | -> | Plus |
arm_2R | 2579798..2580008 | 416..626 | 100 | | Plus |