FMO11214.5prime Sequence
1104 bp (1038 high quality bases) assembled on 2011-12-02
> FMO11214.5prime
CAGTCGACATGTCCATTGCAAACGTTTCCACGCACTACATATCCGAGAAG
GTGTCCCAAGTGCGCTGGCTTCCGGAGGAACTGCAGCAGAGCGAACGGTT
CGTTACTGGAAGCTGGGACATGGACCAGAACTTCGTGCGCCTCTGGCGGC
TACAATCGAACCAATATGTCACCGCCACGGATTCGGAAGTGGACCAGATA
CCTCGCTGCATGGACAAGGTGAGAATGGAGGACGATGTGACCGCCATGGA
GTTCGTCGACAAGGACACGCTGGCTGTGAGCTGTGCCGATGGTCATCTCA
GCGTGTTTAACGTCCATCGAGCCGTGGAGGAGGATCAGATGCAACGTACG
TCCCGATCGGGACGTCTGCACTGCTTCCAACGTAGCCAGGAGCCCGCTCC
TTGCACCGACCTTTCTGTTTACGGCACGGATATCGCCACCGCCGGCGAGG
ATGGGTGTGTAAGCATCGTCTCCGTGGAAAATGTGCGCCAGGTGAAGCGA
CAGATTGAGGCGGACAGCATGGCGCTGTTTTCCATTTGCTATATCAGCCA
GCAGGAACTGGTGACTGCCAATAGGATGGGTGTTATCCGAATGCTGGACG
CCCGAGTGGCCACTGAAGCGCAGCCGAAGACCACCTTTATGGTGGCCTCC
CAGGATGACAAGTCGAACTTTGTCTCGTCCCTTGCCAAGCATCCGATGCA
GCAACATATTTTACTTTGCGGCAGCGAAGAGGGTTCCATAACCGTCTGGG
ATATGCGAAACCTCAGTTATCCCGCCTCCTATCTCAGCGCTCACAAAAGT
CCCATCAACGAGATAGGCTTCCATCAAAAGGATCCCAGCAAACTGTTCAC
CGCCGCAGAATGTGGCGAGGTGTGGATGTGGTCAGAGAACAAAGTTCTCG
GGTGCGACTATAACAAAGACGACACAGCCCCTGTTGTCTGGCGATCGTGT
TCGCCTCCCTGGTCGATGTGAGGAAGTGCTGAGTTATTGTTCCGCAAGTC
CATCAACTCCTTCGATGGTGCCTGGAAAGTCGTCTGGGTCTGCGGAGGGC
GACCCGAAGCCGTTTACCTTACTGATATATTGGTTGCAGCTTTTCTAGAC
CCAT
FMO11214.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nup43-RA | 1211 | CG7671-RA | 83..1140 | 9..1069 | 4975 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18367067..18367842 | 291..1069 | 3315 | 97.3 | Plus |
| 3R | 32079331 | 3R | 18366720..18367006 | 9..295 | 1435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:19:43 has no hits.
FMO11214.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:37 Download gff for
FMO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7671-RA | 65..1138 | 9..1085 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:24 Download gff for
FMO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup43-RA | 83..1156 | 9..1085 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:06 Download gff for
FMO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup43-RA | 83..1156 | 9..1085 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:06 Download gff for
FMO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18366720..18367002 | 9..291 | 100 | -> | Plus |
| 3R | 18367068..18367858 | 292..1085 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:24 Download gff for
FMO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14192442..14192724 | 9..291 | 100 | -> | Plus |
| arm_3R | 14192790..14193580 | 292..1085 | 97 | | Plus |
