FMO11215.5prime Sequence
1104 bp (974 high quality bases) assembled on 2011-12-02
> FMO11215.5prime
CAGTCGACATGGCTTTGGTTTGCGTAGAGGACTTTGAAAAGAAGGCCGTT
GGGCAACTGGAGAAGAATGCCCTGGACTACTACCGTAGCGGAGCCGGTGA
GCAGTTCACCTTGGGACTGAATCGCGAGGCCTTCCGCCGGCTACGCTTGC
GACCTCGTTGTTTGAGAGATGTCTCCCGCCTGGACATTAGTACCAAGATC
TTCGGCGAGCAGATGCAGTGGCCTCTGGGCATTGCTCCGACGGCTATGCA
GAAGATGGCCCATCCGGACGGCGAGGTAGGCAATGCCAGGGCGGCCGGAA
AAGCCGGCTCCATCTTTATACTCAGCACACTGTCCACCACTTCGCTGGAG
GATTTGGCAGCCGGTGCCCCGGATACCATCAAATGGTTCCAACTGTACAT
CTACAAGGATCGTACCATAACGGAAAAGCTGGTACGTCGTGCCGAGAAGG
CGAACTTCAAAGCGCTCGTCCTGACCATCGATGCTCCAATCTTTGGACAC
CGTAGAGCCGATGTGCGCAACAACTTCAGCTTGCCGTCGCACCTGTCATT
GGCCAATTTCCAGGGCGTTAAGGCTACTGGAGTGGGTAATGCCGCTATGG
GCGCCTCAGGCATTAATGAGTACGTCTCCAGCCAGTTTGATCCAACCATA
ACCTGGAAGGATATTGCCTGGTTGAAGGGCATCACTCATCTGCCCATTGT
GGTCAAGGGAGTGCTGACTGCCGAAGATGCTGTGTTGGCCCAGGAGTTTG
GATGCGCCGGACTCATTGTTTCAACCACGGTGCTCGTCAGATCGATACGG
TTCCGGCCTCGATCGAAGCCCTGCCAGGAGATCGTAAAGGCCGTGAGAGA
TATCTGGTGGTTATGCTGGACGGAGGCATTATGCAGGGCAATGATATCTT
CAGGCTTTGGCTTTGGGAGCCAAGACGGTCTTTGTGGTCGTCCGGCTGTC
TGGGGATTGCCTACAATGACAGAAAAGCGTGAAGGAGATGCTGATGGTGC
TGAGAAAGGACTTTGAAACAACATGCCGCTGATCGGTTGCCAAATTTGGG
AAAACTTCACGTTCGCAATGTTGTCATGAAAGTCCATATGGCAAGCCTGC
AGCT
FMO11215.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18003-RB | 1322 | CG18003-RB | 85..1181 | 8..1096 | 4955 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10884103..10884767 | 412..1070 | 2705 | 96.5 | Plus |
| 2R | 25286936 | 2R | 10883631..10884035 | 8..412 | 2025 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:19:52 has no hits.
FMO11215.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:38 Download gff for
FMO11215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18003-RA | 3425..4491 | 1..1065 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:30 Download gff for
FMO11215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18003-RB | 81..1147 | 1..1065 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:10 Download gff for
FMO11215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18003-RB | 81..1147 | 1..1065 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:10 Download gff for
FMO11215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10883627..10884035 | 1..412 | 99 | -> | Plus |
| 2R | 10884104..10884761 | 413..1065 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:30 Download gff for
FMO11215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6771132..6771540 | 1..412 | 99 | -> | Plus |
| arm_2R | 6771609..6772266 | 413..1065 | 96 | | Plus |
