FMO11224.5prime Sequence
1131 bp (1007 high quality bases) assembled on 2011-12-02
> FMO11224.5prime
CAGTCGACATGTACCTAATAATCATCGCCCTGCTTGCAAGTGTATCCGCT
TTAGGCCGCCCAGACTTGGAGGACTACTGCAATGATTCCTATTGCCATTT
ACTTGGTCGGAGCCGGACGTTTAGCGATAAGAAGGCTACCAAACTAACCG
AGTTCCACATGGACTCCTGCGAAAAGAAGGTACTCAAACTTATGCCCAAT
CTGCGCACCCTGGAGCTGGAGAACTGCGACAGTCCGGACTTCACCATGAA
CGACCTGAATCAACTGCCGTACCTAACAAGCCTTCAATTGCGACGTGGAA
ATCTTTTGGGGCTGCACGACGAGCACTTCTCGAAGTGGCCAAACATGAAG
ATCCTTATGCTGGGGGGGAACAACATAACGAGACTATCCAATGAATGCTT
TAAAGGCCTAGCTCAGCTCTGGCTGCTGTCTCTGCCGGGGAATGGTATTC
AAGGTTTGCCATGGGATGTATTTCAAAACCTACCAGAACTTCTGCATCTC
GACCTAAGTGGCAATAGAATCGAAACTCTTCACGAAAACATTTTTACAGG
CGTTCCCAAGCTAGAGATGCTGCTACTCAATGGGAATCCCTTGACATGGA
TAGCGCCTACGTCTCTAAAATCTCTAAGTAACCTACGCCTTTTGGACATG
AGCAACTGTGGACCGCTGCCGGATCTTTCATTGCCCGGTGCACATACCTT
GATCCTCGACAACAGCGGTGTGCAGCGCCTGCACATTTTGGGCAGTGTCC
ATAAACTCCAGGCGAGGAAAAACCATATAACCGAGATTAAATTACCCGAC
AAAAGCTCTGTTATCGAAACTGGATTTGCATAGCAATTTACTGACCGCTA
CCGATATTCCCAAACTTCTAACGGGCATGTGGCGACTGCACGACTGCATC
TATCCGAGAAATATCATAGGGATATACGCAGCCGCCGGAAGCGACAATAC
GAGCGAGCTCTTCATACTTCCCAATCTTATGTTTTATGAACCTATCGGCA
ATCGCCTGACGCGTCTGCACTTCGAATTCGCCATTCATGGGAAAGGCTTA
CCTCATTTGGACGCCTTCGTACAATAAAATATATTGCTTCCCGCAAGGTT
GGCATTGACGAGCTTTCAATCTTCAGTTTGC
FMO11224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7800-RA | 1778 | CG7800-RA | 105..1219 | 9..1125 | 5190 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8218061..8219175 | 9..1125 | 4895 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:19:24 has no hits.
FMO11224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:36 Download gff for
FMO11224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7800-RA | 76..1206 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:16 Download gff for
FMO11224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7800-RA | 97..1227 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:01 Download gff for
FMO11224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7800-RA | 97..1227 | 1..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:01 Download gff for
FMO11224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8218053..8219183 | 1..1131 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:16 Download gff for
FMO11224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4043775..4044905 | 1..1131 | 97 | | Plus |
