Clone FMO11229 Report

Search the DGRC for FMO11229

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:112
Well:29
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13114-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11229.5prime Sequence

1026 bp (1002 high quality bases) assembled on 2011-12-02

> FMO11229.5prime
CAGTCGACATGTTCGAACGCTGCAATTTATTATTTATGACCATGCTGATG
GCATCGGCACTATTGACCCAAGCCCATTTCCCGGAATATTGTGCGGAATG
TGAACAGGAGGTGTGGGAACAGGTGCCGTGCAGCGAGGTGCCCACAACGG
TAGCGCCAACAACAACCGGAGGCTCTACGTTGAGCCCGCCCACAACCAGC
GCCACCAGCCCGGGACCTATTTACCCAACAACAACCAGTGCCCCACCCAC
GCCCACGGATTACACTACACAGCCATCGGAGTACAAGAAGTGCTACTGCG
AATGCAAGCTGGGCTGCAAGGAGTTCTGCCGCAAGGTGATCTCTTCTGAG
CCCAAGCAGCCGCTCACCCAGATCTCATCCATTGGGGAGTATGCCCCAGG
TGGCCAGGTGGAGTACACGCATGTCCATCAGCGCAAATACTTTCCCAAGT
ACGGAGGCGAATCCTATGGGGGATTGGTAGGACCAGTGGGCGGACCCAAG
GCCTATAAGCCATATCCATTGGTCTACGAACAGGCGGCATCAGCTGCTTC
ACCGGCTTCCATTCCCTCGGTGGCTTCCTCACCAGCGGTGGCCAGCATAG
CTGCTCCTAATTACACGCTGGAGGAGTTGGCCCAATTGCTTAGCACTGCG
TATGGCACCAAGAAGGGCTACCCAGCTAGTGTGCCAACTCCGCCACGTAT
TCAGCTTCAGCCAGCTCCCTCCGTTTTCTATTCCCCGGTTCCAAGCTACA
AAAAGCAAGTGGTTCCACTCGTGAGCAAAGTGGCGCCGGCACCCAAAATC
TCCTCCAGCATTAAGTATGCCGCCTCAGCGGTTTCATCATCATCATCGGG
CGTGTCGGTGGGCCAAGATAAAGACTCCCTACGAGGAGAAAATTGTGGTG
GCCACACCGTCTCCATTTATGAGAGATCCACATCGTAATCCTATTGTTGA
AGCACTCAAGGAATACTCGGCGCCCAGACGGAAGTCTATCCCCGTTGTGC
AGAGTCAAACGGATTCGTATCCCACT

FMO11229.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG13114-RB 1530 CG13114-RB 123..1137 9..1024 4905 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9546017..9547031 9..1024 4780 99.1 Plus
Blast to na_te.dros performed on 2014-11-27 00:21:56 has no hits.

FMO11229.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:47 Download gff for FMO11229.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 113..1137 1..1026 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:36 Download gff for FMO11229.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 113..1137 1..1026 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:00 Download gff for FMO11229.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 113..1137 1..1026 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:00 Download gff for FMO11229.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9546010..9547031 1..1026 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:36 Download gff for FMO11229.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9546010..9547031 1..1026 98   Plus