Clone FMO11232 Report

Search the DGRC for FMO11232

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:112
Well:32
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43089-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11232.5prime Sequence

458 bp (458 high quality bases) assembled on 2011-12-02

> FMO11232.5prime
CAGTCGACATGTCGTCCTCTTCTTCAGAAGCAATTCAACTTCAGACCAAC
GATGGTGTCATTCATACAGTGGACATGCGCTTTGCTCTACAGATATGCCC
CGTGCGCAATATGATAATGCAGGAGAGACAGAAAAATTTGCACACCGATG
ATGTTATCCCTCTACCGAGAGTCGATGCCAAAAACCTTCGATTTATAATC
AAGTGGTGGACATCTGTGCAGAATCTAGATGAAAATCTTCTCACTATGGG
CAAAAGAAAACTTAAGCAGTTGCTAACGGCGGAACATGCCAACCATCAGT
TTCTGCTGCAAATCATCCTTGCCGCCGACTATCTGCAAATGGAGAAATTT
TTGCTGATCAGCACACATCTCATGGCGGATGCTTTAAATGAATGTGAAAG
TGTCGAAGAGATACGTAGAAAGTTTTTTTGGAATAAAGTGGCAAGCTTTC
TAGACCAT

FMO11232.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG43089-RB 499 CG43089-RB 54..485 9..440 2160 100 Plus
CG43089-RC 638 CG43089-RC 54..485 9..440 2160 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3714133..3714564 9..440 2160 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:22:13 has no hits.

FMO11232.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:48 Download gff for FMO11232.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43089-RA 73..514 1..444 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:44 Download gff for FMO11232.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43089-RC 47..488 1..444 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:07 Download gff for FMO11232.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43089-RC 47..488 1..444 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:07 Download gff for FMO11232.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3714126..3714567 1..444 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:44 Download gff for FMO11232.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3714126..3714567 1..444 98   Plus