FMO11240.5prime Sequence
713 bp (713 high quality bases) assembled on 2011-12-02
> FMO11240.5prime
CAGTCGACATGGGTGATTCCAGCGACTCAGACTCTTCTACTGAATGGGAG
CAGAACACTAGGGTTATTTCCTTACCCTTTTCCAGAAACCGTTCACATTT
GAGCTCTCGCCTCAGTTACCTGGTGGGACTTCAAATGGAAAACTTCAGGA
CCTCGAATAATTCTGGAGTATCACAGCGAATCCATAACACCGGGCCCACT
CCCGTACTCGCGCCCTCCGGATTAAGATCCCGCTTACTCAGCGGTTCCTC
TGAGCGGAATCCAAATGAGTATTACGGAGACTCGGACTCCTCAAGCAGCA
GCAGATCTATCGACAGAACCCCATTCCTGTTGGAGTATTCCAGCGACTCA
GAGTCGTCTAGTTCCAGTGATAGTGAAAGCTCATCGACCAGCATTAGCTT
CGATAGCAGTATGAGCTCCACCGAATCATCAACACCAATGGGACATACAG
AATCCTCAGATTCAAACGAGGATTCTCCTCCCAACAAACGGATCAAATCA
GATGACGAGGAGTCCAAGAAATCTGTCTTGCCCTACAACTGCCCTGTGTG
CCTGGAAGATGTCCGCGAGAAGCTACCAGTGTCCACCAATTGTGGCCACG
TTTTCTGCAAAGCGTGCATTAAGAGAGCTGTCGACACTGGCAGGGTATGC
CCATTGTGCGGAGTGGATGAGCCCGAATTCCATCGTATTTTCTTGGCAAG
CTTTCTAGACCAT
FMO11240.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:23:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elfless-RC | 1376 | CG15150-RC | 100..786 | 9..695 | 3435 | 100 | Plus |
| elfless-RB | 1643 | CG15150-RB | 100..786 | 9..695 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:23:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18010500..18010866 | 695..329 | 1835 | 100 | Minus |
| 2L | 23513712 | 2L | 18011077..18011207 | 252..122 | 655 | 100 | Minus |
| 2L | 23513712 | 2L | 18011261..18011376 | 124..9 | 580 | 100 | Minus |
| 2L | 23513712 | 2L | 18010934..18011011 | 329..252 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:23:26 has no hits.
FMO11240.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:53 Download gff for
FMO11240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RC | 96..790 | 4..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:23 Download gff for
FMO11240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 96..790 | 4..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:34 Download gff for
FMO11240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 96..790 | 4..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:34 Download gff for
FMO11240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18010496..18010865 | 330..700 | 99 | <- | Minus |
| 2L | 18010934..18011011 | 252..329 | 100 | <- | Minus |
| 2L | 18011078..18011206 | 123..251 | 100 | <- | Minus |
| 2L | 18011263..18011380 | 4..122 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:23 Download gff for
FMO11240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18010496..18010865 | 330..700 | 99 | <- | Minus |
| arm_2L | 18010934..18011011 | 252..329 | 100 | <- | Minus |
| arm_2L | 18011078..18011206 | 123..251 | 100 | <- | Minus |
| arm_2L | 18011263..18011380 | 4..122 | 98 | | Minus |
