FMO11241.5prime Sequence
737 bp (737 high quality bases) assembled on 2011-12-02
> FMO11241.5prime
CAGTCGACATGAAGCCAATAATGGAAACGAATATACAGGCATCCATTTGG
AACAAGAGATTCGAATCGACGATGATGAGTTCTTCCGAGCAAAGTTTTGC
CAAGTCCAATGGGACTAAAAAGAAGACTGTGACCTATTCACGTTTCATCC
GCACCGAACGTGTCGCAGACGGACCGACCAATGCGGTGCAAAAGAAGACT
GTGTTCTTTTCGCGATTCGACCGCACCGCTCGCGCCGAAGAGGACCTAAC
CCGTCAATTGGCCAGCGTGTCCTTAAAACCAAAACAGCCTGTGGCTTCCA
CCTCGAATGAGCAGTTTTTTGCCAGCAACCTGCATTACTATCCCCATCTG
CCCCAGCCAACTGCGGTGGGCCACTACCAGACCTATGCCGAAATCAAGAG
CCTCTGGTTGAAGGGTCATTTCTCCCAAGCTTGTAACCCCACCTCGCGGT
CGATGCAACCGCCTCGTCGTATTTCTATCACCAACGAGTTCCCGGATGAT
CAACCGAAGCCAGCTCCCAAACGCCGCTACTCGCTTGTCCGCCGCAACTC
GATTAACCTCCCAATTGGGTCCAATTTTGCTATGCCCGTGCTGATGGAGG
AGGAGAAGGAGGAGGATGAAGTGAAGGATCTAAATGAGAACAGCGGCTCC
ACCAAGCCAGCTACATCGACCTCGAAAGGCGCAATCCCGAATCAGCCCAA
GAAGTTCGCCTTAACCTTCGCAAGCTTTCTAGACCAT
FMO11241.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14811-RB | 849 | CG14811-RB | 105..815 | 9..719 | 3540 | 99.9 | Plus |
| CG14810-RB | 717 | CG14810-RB | 55..333 | 12..293 | 710 | 83.7 | Plus |
| CG14810-RA | 720 | CG14810-RA | 55..336 | 12..293 | 675 | 83.2 | Plus |
| CG14810-RB | 717 | CG14810-RB | 332..494 | 454..616 | 530 | 88.3 | Plus |
| CG14810-RB | 717 | CG14810-RB | 554..666 | 607..719 | 340 | 86.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:23:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1821503..1822172 | 719..50 | 3335 | 99.9 | Minus |
| X | 23542271 | X | 1819891..1820119 | 278..50 | 605 | 84.3 | Minus |
| X | 23542271 | X | 1819718..1819880 | 616..454 | 530 | 88.3 | Minus |
| X | 23542271 | X | 1819546..1819658 | 719..607 | 340 | 86.7 | Minus |
| X | 23542271 | X | 1822236..1822277 | 50..9 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:23:36 has no hits.
FMO11241.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:54 Download gff for
FMO11241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RA | 1..651 | 72..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:30 Download gff for
FMO11241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RB | 96..815 | 1..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:36 Download gff for
FMO11241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RB | 96..815 | 1..719 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:36 Download gff for
FMO11241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1821503..1822171 | 51..719 | 99 | <- | Minus |
| X | 1822236..1822281 | 1..50 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:30 Download gff for
FMO11241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1715536..1716204 | 51..719 | 99 | <- | Minus |
| arm_X | 1716269..1716314 | 1..50 | 92 | | Minus |
