Clone FMO11243 Report

Search the DGRC for FMO11243

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:112
Well:43
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34248-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11243.5prime Sequence

302 bp (302 high quality bases) assembled on 2011-12-02

> FMO11243.5prime
CAGTCGACATGTACAGGAAATTAGTGGTGCTCCTCCTTCTGATCCACCTG
GCGGCCGCGGGTCAGATCCAGGATGCTGCCGAGGAGATCGATGTGCCGCC
TGCCCATCGGGCTGCTCCACCACCGCCCCGCCAGGCAGCTGGAGCTGCTG
TTCCCCCACCACCACTGGGGCCACCACCACTTGTGGGCTCTGCACCGCCG
CCGAGCTATCCTTTGTTCTACCCAGCTGCGTGGCTGCCATTCGGACGCTA
CAGCAACTCCATTCCCGTCCACATAGTGGCTGCCGCAAGCTTTCTAGACC
AT

FMO11243.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:23:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG34248-RB 452 CG34248-RB 41..316 9..284 1380 100 Plus
CG34248-RA 533 CG34248-RA 138..398 24..284 1305 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:23:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16270505..16270765 284..24 1305 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:23:55 has no hits.

FMO11243.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:55 Download gff for FMO11243.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34248-RB 41..316 9..284 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:38 Download gff for FMO11243.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34248-RB 41..316 9..284 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:45 Download gff for FMO11243.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34248-RB 41..316 9..284 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:45 Download gff for FMO11243.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16270505..16270765 24..284 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:38 Download gff for FMO11243.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16263605..16263865 24..284 100 <- Minus