FMO11244.5prime Sequence
725 bp (725 high quality bases) assembled on 2011-12-02
> FMO11244.5prime
CAGTCGACATGGAATTCAATTACCTTGCTGATTCCGCACTTTCCACTTTA
GTGGAAAACAAAAAGTTCTTCAAGGAAATGTCAGATTTCGTGTCCGATTT
CAGCGATGGCGGGAAGATCAAGAAGTTGCTCGAGCAGAGCGTTGAGCAGA
GCGTGGAGCACGCCGTGAATGTAGTCCATATGAAGATAAAGCACCAATCG
CTCAACAAGGCTATGAATCAGGTCAAAAACTCTAGCGCCACCATCGAGGA
GTTCGAGGAAGTCTGGAAGGAACGCTCCAAAGCGGTGGAGCAGAAGCGCA
TCAATGTCAAGAATCTACACGAGTTCAAGAACTTCGTAAAAGCAGTTGAA
TCAGCAGCTGGTCAGGCGGGTGCGGAAGTCAATGATCAAGCGAATGGCAC
CGCCTATGATGAGGACCTTATTATGGAAGACTCCGGCAGCGAGGTCTTCT
CGTTCTACGATCCCTGGTCCAAGGCCCTGACAAAGAACCCCATGCGCAAC
AAAATGTGCGGTCACATCTACGACCGCGACTCGGTGATGCCGATCATAAT
GGACCGCATTGGCATCCGATGCCCGGTGCTCGGCTGCGCCAACTTGTGCT
ACATCCAGCCAGATCACCTGGTCCAGGACGCCAATGTCCAGCAAAAGATA
CAACAGAGCATGTCTAACGCGATCGTGGATGTAACTGCCTCGGAGGAGGA
CGAGGAAGCAAGCTTTCTAGACCAT
FMO11244.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:24:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
qjt-RB | 834 | CG13732-RB | 55..753 | 9..707 | 3480 | 99.9 | Plus |
qjt-RA | 990 | CG13732-RA | 211..909 | 9..707 | 3480 | 99.9 | Plus |
cerv-RD | 1141 | CG15645-RD | 283..960 | 9..707 | 1595 | 82.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:24:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17479362..17480060 | 9..707 | 3480 | 99.9 | Plus |
X | 23542271 | X | 15577167..15577718 | 707..147 | 1345 | 83.1 | Minus |
X | 23542271 | X | 15575060..15575354 | 701..407 | 590 | 80 | Minus |
X | 23542271 | X | 15555366..15555660 | 701..407 | 545 | 79 | Minus |
X | 23542271 | X | 15575375..15575510 | 359..224 | 275 | 80.1 | Minus |
X | 23542271 | X | 15555727..15555813 | 310..224 | 270 | 87.4 | Minus |
X | 23542271 | X | 15577813..15577889 | 85..9 | 235 | 87 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:24:09 has no hits.
FMO11244.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:56 Download gff for
FMO11244.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
qjt-RA | 114..815 | 9..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:45 Download gff for
FMO11244.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
qjt-RA | 211..909 | 9..707 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:51 Download gff for
FMO11244.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
qjt-RA | 211..909 | 9..707 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:51 Download gff for
FMO11244.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17479362..17480060 | 9..707 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:45 Download gff for
FMO11244.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17472462..17473160 | 9..707 | 99 | | Plus |