FMO11245.5prime Sequence
383 bp (383 high quality bases) assembled on 2011-12-02
> FMO11245.5prime
CAGTCGACATGAAAATTACCATTGCAATTCTAGGACTTTTTCTGGCACTT
ATTTGCAGCCTGGAATCGCCAACCGCAGCGTGCGATATCCAAGCAGTTTA
TAATCAAACCTTAAAGTTCTGCGAAAACAACTTCTTTCTGAACATATTCT
TGTGCACCGGCTTGTCTTACGGTGTCGGCAACGAGAAATTTGTTCAGACG
CTCCAGTCGCAAAGGAAGATCTTGTGTGCAATACCATTTTTTGCTGAAAT
TTGCAAAACCTGCGATTTTTCGACGATTGTCTCAAATGATCAGAATGCTA
CGATTTCAAGCGGAAATTCAACTGCAGACGCCACCCGAACTTTGAAGCTT
GCCGATCTGACGCGTGCAAGCTTTCTAGACCAT
FMO11245.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:24:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42704-RA | 501 | CG42704-RA | 20..376 | 9..365 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:24:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7412973..7413171 | 167..365 | 980 | 99.5 | Plus |
X | 23542271 | X | 7412816..7412907 | 80..171 | 460 | 100 | Plus |
X | 23542271 | X | 7412687..7412758 | 9..80 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:24:18 has no hits.
FMO11245.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:57 Download gff for
FMO11245.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42704-RA | 13..379 | 1..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:51 Download gff for
FMO11245.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42704-RA | 13..379 | 1..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:53 Download gff for
FMO11245.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42704-RA | 13..379 | 1..369 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:53 Download gff for
FMO11245.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7412680..7412758 | 1..80 | 95 | -> | Plus |
X | 7412817..7412906 | 81..170 | 100 | -> | Plus |
X | 7412977..7413174 | 171..369 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:51 Download gff for
FMO11245.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7306713..7306791 | 1..80 | 95 | -> | Plus |
arm_X | 7306850..7306939 | 81..170 | 100 | -> | Plus |
arm_X | 7307010..7307207 | 171..369 | 98 | | Plus |