Clone FMO11246 Report

Search the DGRC for FMO11246

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:112
Well:46
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11581-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11246.5prime Sequence

910 bp (849 high quality bases) assembled on 2011-12-02

> FMO11246.5prime
CAGTCGACATGATGCAGCCATGGGCCGTTGTGGTCCTACTTCTGCCCCTG
ATCAACGGAGATGTGAGTCACCTGCCCAGGGAATATATACCGCCCAGTGC
GGAACTGGAGCCAACCACACGGTCTGCTGCTGATGGCCAGGAGGTGCAGA
AGGATCCATCTGGATTCTATCCATCGACTGGACTGCCACTGCCGCCGGGC
TATGCCATTCCCACGGGCAGCAACGTTTTGCCACAGCCTGTCCAGCCGCC
AAACTTCCCTCTGCCCATCTATCCACCATTCTACGGCTTCGGCGGAGGTC
CTGTCGAGCAGGGAGGAGGACATGGTATTGGGCCAGTGCCTTCGGCCTAT
CCCAACGGAGGTGCATTCCCGGCGGGTCCTACCAATGGAGGCGCATTCGC
AGGGGGTCCTACGAATGCGGCCTTCCAACTGCCACCAGGTGGTCCTTTCG
GTCCGCAAGCTGGTAATTTTGCCCAGCCAGGTGGTTTCCCGCAGGCAGGT
GGGTTTCCCCCACAAGGAGCTGGCTTCCAGCCACAAAGCATCCCTGGCAA
TGGATTCCCAACGCAAGGAACTCCCTTCTCACCACAGCAGGGAGTGTTCC
CATCACAAGGAGGTGCCTTCGGGCCACAGGGAATACCGGGCAATGGTTTC
CTAGGAGGTAACTTCCCGCCACAGGGAGGGCCCTTCCCAGGATCCGCATA
TCCACCGGAGTTCTTGACAAACCAAGGGACTTCCCCTCACAAATCCCCAG
GGTCCCTTCCAAGGACCCAGTCCAGCAGGATTCAATGTGCCCGCATGATT
CGGCGGACCTGTGCCCGGCCAGAATCCCTACCACAATTTGGACCCGGTTT
CGGAGGACCCGCTCGCCGGCTACTCCGATGAGCCGGCGAAGAGCACCAAG
GACAGTTGAA

FMO11246.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG11581-RB 1534 CG11581-RB 20..927 4..906 4310 98.8 Plus
CG11581-RA 1096 CG11581-RA 20..927 4..906 4310 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14176942..14177831 4..891 4200 98.9 Plus
Blast to na_te.dros performed on 2014-11-27 00:22:30 has no hits.

FMO11246.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:50 Download gff for FMO11246.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11581-RA 1..905 9..910 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:52 Download gff for FMO11246.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11581-RA 16..929 1..910 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:15 Download gff for FMO11246.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11581-RA 16..929 1..910 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:15 Download gff for FMO11246.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14176938..14177851 1..910 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:52 Download gff for FMO11246.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14070971..14071884 1..910 98   Plus