Clone FMO11247 Report

Search the DGRC for FMO11247

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:112
Well:47
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18735-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11247.5prime Sequence

1117 bp (1011 high quality bases) assembled on 2011-12-02

> FMO11247.5prime
CAGTCGACATGTGTAATTTTCATCTTCTGCTGATTCTTGCCACAGCACTG
GGCGATTTGGCTTGTGCCACGCCCTCTCTGCGTTCCGCCTCCGATCCTGA
GAAGATCTTAAACAATCTAGCTCAACTAAGGCAGAGTAGCTTTCTGGACT
GGATTCAATCGATCCTGGGACCCGAGGTGCCAGCCGAATGGAGCTCTCCG
GCCAAAAGGGAGTGCGCAGAGTGCTCCTGTGGTAATATCAATACTCGTCA
TCGCATCGTCGGAGGTCAGGAGACGGAGGTCCATGAGTATCCCTGGATGA
TAATGCTCATGTGGTTCGGTAATTTCTATTGCGGCGCTTCTTTGGTTAAC
GATCAGTATGCCTTAACCGCTGCCCATTGTGTAAATGGCTTCTACCATCG
TTTGATCACGGTCCGATTGCTGGAGCATAATCGTCAGGATAGCCACGTCA
AGATCGTGGATCGCCGGGTTTCCAGGGTGCTCATCCACCCGAAGTACAGC
ACCAGGAACTTTGACAGTGACATTGCTTTGATTCGTTTCAATGAACCAGT
TCGTCTTGGCATCGATATGCATCCAGTATGCATGCCCACTCCGAGCGAAA
ATTATGCGGGTCAAACTGCCGTGGTCACCGGATGGGGAGCTCTGAGTGAG
GGCGGACCAATTTCTGATACCCTCCAGGAGGTGGAAGTGCCCATCCTCAG
CCAAGAAGAGTGCCGCAATAGCAACTACGGCGAGTCCAAGATTACCGACA
ACATGATCTGTGCCGGCTACGTGTAGCAAGGTGGCAAGGACTCCTGCCAA
GGAGACAGCGGTGGACCCATGCATGTACTGGGTTCCGGCGACGCTTACCA
GCTGGCAGAATCGTGTCCTGGGGGCGAAGATGTGCAAGCCGAATGCCCGG
GCGTTTATACACGAGTGGCAGCTTCAATGATTGAATGCGGAAACACCAGG
GATGCCTGCTCTGTGCCCAACAGAAGCTGCTGGGGAACCACCTTCCCCTA
TGAAACCACCGAGCAGGAAACCAAGAGAACCCCACTGCAAATGACCACTG
AAGCTGATCCGAGGTGAAGGAGGCCAATAGTTGATGCAAGCTTCTAGACC
ATCTTGGCCGCTGCACA

FMO11247.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG18735-RA 1179 CG18735-RA 29..1120 8..1085 4930 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21798122..21799167 1043..8 4595 98.2 Minus
Blast to na_te.dros performed 2014-11-27 00:22:38
Subject Length Description Subject Range Query Range Score Percent Strand
Doc2-element 4789 Doc2-element DOC2 4789bp 1358..1426 89..21 120 63.8 Minus

FMO11247.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:50 Download gff for FMO11247.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18735-RA 1..1095 9..1089 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:57 Download gff for FMO11247.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18735-RA 21..1120 1..1085 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:19 Download gff for FMO11247.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18735-RA 21..1120 1..1085 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:19 Download gff for FMO11247.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21798076..21799170 1..1085 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:57 Download gff for FMO11247.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17685581..17686675 1..1085 97   Minus