FMO11249.5prime Sequence
967 bp (967 high quality bases) assembled on 2011-12-02
> FMO11249.5prime
CAGTCGACATGGGACATTCGTCAAATTTGTTTTGGTTCTTTGTTTTCGTA
TTAATCACAAAAGTATACGCCGCATTGTCCAATCCATTGTCATCAAAAAT
CGAAGTATACAATCAGCCTGAAGTTACACCCGAAAAAGAAAGAGCCAAAG
TGAGAAACTATTTCGTGCATGAGCCATACGGGCCCAACACATATTCCTTT
GGCTATGAGATTAATGATCCGCAGACGCAAAACTCTCAGTTTCGAGAAGA
AAAAAGATTTGTGAATGGCAGCATTCAAGGTAGCTACGGGTATGCAAGGC
CAGATGGACGCATTGAAGTCACCAAATATATGGCGAAAGAGGATGGCGGT
TACTCGGCCCAGATTCAGATTTTTAAAGCAGGCGATGAGAAAGTCAAATC
AGTTTGGCCCACCGAAAGACCTGATATATTAGTGGAGAGAAGCAAATCCT
TTGCTCCTTCAAATATCACCTGGGATCCAAAGAGCCATCTCAACGTGACC
GTCTCTCATGTGGCGGATCATGTGGCCCAGCAGCTGAAGCAGCAACATGG
CCTCGACCTAAACCACATCGATGTGACCAAGGATGTGCTTAAACCAGCGG
TGCTCGATGTTATCCAGGGCAAGGAACCAACTAAGGGTCGCCCTGTTCAG
AATCTAATTCCTCAGCATTTTCCCATAGTTCCCTTCCAACTGCCGGCGGA
TCAAGAAACCACCAAGGCCCACCACAGCGGAGCCCCAGAAAACTGAAAAG
TTCAAAATACCACAGGGCGCAATCCAACAATGCCGAGAAAGGCTCAACAA
GTCGAGGAGCCGGAGGCAAGATTACCGCCACCCGGGCCACTGGTCAATAG
CAGTCCAAGCGATGGAAATTGGCCACCGGCGAACCATTGAGGCAAATCGC
CGTGAATTCCTGGCCAATTTACCCAACCTAAGTGAGGCCAGGCCAGAGGC
AAGCTTTCTAGACCATT
FMO11249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34462-RA | 1157 | CG34462-RA | 97..1033 | 8..948 | 4560 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:24:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8329349..8330113 | 180..948 | 3600 | 99.1 | Plus |
| 3L | 28110227 | 3L | 8329160..8329299 | 42..181 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:24:58 has no hits.
FMO11249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:59 Download gff for
FMO11249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 1..939 | 9..952 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:11 Download gff for
FMO11249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 90..1042 | 1..957 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:10 Download gff for
FMO11249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 90..1042 | 1..957 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:10 Download gff for
FMO11249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8329160..8329298 | 42..180 | 100 | -> | Plus |
| 3L | 8329350..8330122 | 181..957 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:11 Download gff for
FMO11249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8322260..8322398 | 42..180 | 100 | -> | Plus |
| arm_3L | 8322450..8323222 | 181..957 | 98 | | Plus |
