FMO11251.5prime Sequence
677 bp (677 high quality bases) assembled on 2011-12-02
> FMO11251.5prime
CAGTCGACATGGGCAAACCAGGATTCAGTCCACGCGGTGGTGGCGGCGGC
GGCGGAGGAGGAGGAGGTGGATTCCGTGGGCGTGGTGGCGGCGGCGGCGG
AGGAGGCGGTGGATTTGGAGGCGGCCGTGGACGCGGTGGCGGCGGCGATC
GCGGTGGCCGTGGAGGATTCGGTGGTGGCCGTGGAGGAGGTGGTCGCGGT
GGTGGTGGCGGCGGCGGCCGTGGTGCCTTCGGAGGACGTGGCGGCGGCGG
TGGTCGCGGTGGCGGCGGCCGTGGAGGCGGTGGTCGCGGCGGAGGAGGAC
GTGGTGGTGGTGCTGGCGGCTTCAAGGGCGGCAAGACCGTCACCATCGAG
CCGCATCGTCACGAGGGAGTGTTCATTGCGCGCGGCAAGGAGGACGCTCT
GGTCACCAGGAACTTTGTACCTGGATCCGAAGTCTACGGCGAGAATCGCA
TCTCCGTTGAGACCAATGGCGAGAAGATTGAGTACCGCGTGTGGAATCCC
TTCCGCTCCAAGCTGGCTGCCGCCGTTCTGGGTGGCGTCGAGCAGATTCA
CATGCCGCCGGGCTCGAAGGTTCTCTACCTGGGCGCCGCCTCCGGAACGA
CAGTCTCGCATGTGTCCCGATGTGGTGGGACCCGAGGGCCCTGGTCTACG
CCCGTGGAGTTCTCACACCGATCCGGG
FMO11251.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fib-RA | 1318 | CG9888-RA | 132..796 | 9..676 | 3250 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23074024..23074466 | 461..19 | 2200 | 99.8 | Minus |
| 2R | 25286936 | 2R | 23073431..23073644 | 676..460 | 935 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:25:15 has no hits.
FMO11251.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:00 Download gff for
FMO11251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fib-RA | 121..791 | 1..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:20 Download gff for
FMO11251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fib-RA | 126..796 | 1..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:17 Download gff for
FMO11251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fib-RA | 126..796 | 1..677 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:17 Download gff for
FMO11251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23073430..23073642 | 462..677 | 98 | <- | Minus |
| 2R | 23074024..23074463 | 22..461 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:20 Download gff for
FMO11251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18960953..18961165 | 462..677 | 98 | <- | Minus |
| arm_2R | 18961547..18961986 | 22..461 | 99 | <- | Minus |
