FMO11254.5prime Sequence
795 bp (795 high quality bases) assembled on 2011-12-02
> FMO11254.5prime
CAGTCGACATGTCGCTGGGCAAGAAGCACGTGTTGGGATTTTCGCCCAAT
GGTGGCCAACTATTTGCCTCGGTGGACGAGTCGGGAGTTCTGCGGATATG
GAACACAGAGACGAACACGCTGTATCAGGAGTTTACGCCCAATCTACAGT
TATCCGGGTCGTGCACAGCTCTCACGTGGGTTTTGGTGGCCGGTTCCCGG
CCCAAGAAGTCGCGGAAGAGCCTCCAGGCACAGGATGCAGCCGGTGATCA
GCTTCACATTGCTCTGGGAACGTACAAGGGCTCAGTGGTTATATACTCAT
TAGCCGAGGGAAAGATTTCTCGAACGCTCAGTGGCGACAGCCATGATGGA
CCAGTGACCTCAATTACAAATGACAACGCTGGCCACCTATACACTGTGGG
TGCCGATTGTAGGGTTGTTGTTTGGTCCTTGACGGACGAGCGCTCTATCG
CCGAATGGCAAGTGGGACCCGAGAAGCCCCAAAATATAGTCTACCTTCAG
AAAAGTGGCACCTTGGCCATTGGCTACCGACAGCTGAAGGTGTACGATAT
CAAGACAAAGGAGCTGGTGGAAACGTTCACCGGCCACTCGGGCGAAATAA
ACACAATCAGCAGCGTGGCGAGCACAGATGGCACTGAATTCGTTTTGACC
ACCCGCGAAGATGGAGCGCGTAATCTGCTTCTGGAAGATCGACAAGAAGG
GCAAGAACAAAGCCTCCGCCTGCACGCTCCTCATGGAGGACTTGGCCTAC
TGTCTACCAGCGAAGTGCGCGACGATGGTCAGCTACGTGTGGCCA
FMO11254.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30349-RA | 2014 | CG30349-RA | 74..860 | 9..795 | 3875 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8907948..8908430 | 313..795 | 2305 | 99.4 | Plus |
| 2R | 25286936 | 2R | 8907591..8907896 | 9..314 | 1530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:25:37 has no hits.
FMO11254.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:02 Download gff for
FMO11254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30349-RA | 72..857 | 9..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:32 Download gff for
FMO11254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30349-RA | 74..859 | 9..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:24 Download gff for
FMO11254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30349-RA | 74..859 | 9..794 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:24 Download gff for
FMO11254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8907591..8907896 | 9..314 | 100 | -> | Plus |
| 2R | 8907950..8908429 | 315..794 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:32 Download gff for
FMO11254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4795096..4795401 | 9..314 | 100 | -> | Plus |
| arm_2R | 4795455..4795934 | 315..794 | 99 | | Plus |
