FMO11255.5prime Sequence
1125 bp (1034 high quality bases) assembled on 2011-12-02
> FMO11255.5prime
CAGTCGACATGTCGCGGCACAGGATAGTGCGCACCATGGACTACAATGAT
GAGTACGACGGCTACGACGACATCTACGGGCACTCCGTGGAGGACGAGCA
CTGCATCTCGCCCACGGATGCCCAGCAATGGCTCTACGATCGGGCTCGTG
GCCAGCAGAGCATCTCGGCGTTCATCAGCAAGAACAAGGACATCCAAGAG
GAGGAGGCCGACGAGGATGAGGACGAGGACGCCGCCTTCGCCAAGGCTCG
CCGCGACTCCGAGAGCTTCCAAATGCCGCAACTGGACGAGATCGAGCAGG
CCAAGCTGAGCTCCTGCGTGGACGAGGTGCGCAGCGTGGTGGGCGATGCC
GTCTCCGAGCGCCGCATCGTGGAGACATCCATGAAATTCGACTATGACAT
GCAGAAGATCCTGGACGAGATCCTCAACGAAGAGACCAACAAGTCTGCCA
AGCCGGCTGTGAATAAGATGAAAGCGCCCGCTGCTCCAGTGCTGCCAAAG
ACGGTCAGCAAAACGGTGCCTACGCCACCACCCAAGATCAGCCTTAAAGA
GCCGCGACGTGGCTTCGAAATACCCTCGCCCAAGGTGCCCTCATCGCCTG
TGGTCTCGGGCAGAAACACACCCGTTGACATTAGCGCCGGCGACGACATC
TCCCGTAGCTCAGCAACCGTTTTCAAGGTCTCCAAGGAACAGGCCGTGCG
CAATGCCCGCCAGCTGTACGAGAAGGAGCGAGCCGACCAGAAGAGCCACA
TTCACATGATTGTCATTGGTCACGTCGACGCCGGGAAGAGTACGCTGATG
GGCCATCTACTGTACGACACCGGCAACGTTTCGCAGCGAGTGATGCACAA
GCACGAGCAGGAGTCCAAGAAGCTGGGCAAGCAGAGCTTCATGTATGCCT
GGGGTGCCTGGACGAGACGGGCGAGGAGCGGGCCCGCGGCATCACCATGG
ACGTGGGCCAGTCGCGTATCGAAACCAGACCAAGATCGTCCACACTGCTG
GATGCTCGGGGGCACAGGACTCATCCGAACATGATCTCCGTGCCCACCAG
GGCGGAAGTTTGCCTCTGGTAGGTGGATGCCTACAAGGGGGAGAGTTGGA
ACTCGGCTTTGTGAGTCTTCGGCGC
FMO11255.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HBS1-RB | 2360 | CG1898-RB | 196..1297 | 9..1111 | 5070 | 98 | Plus |
| HBS1-RA | 2259 | CG1898-RA | 95..1196 | 9..1111 | 5070 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1864040..1865045 | 1016..9 | 4835 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:25:46 has no hits.
FMO11255.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:03 Download gff for
FMO11255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HBS1-RA | 265..1317 | 9..1060 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:36 Download gff for
FMO11255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HBS1-RA | 95..1147 | 9..1060 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:27 Download gff for
FMO11255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HBS1-RA | 95..1147 | 9..1060 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:27 Download gff for
FMO11255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1863993..1865045 | 9..1060 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:36 Download gff for
FMO11255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1863993..1865045 | 9..1060 | 98 | | Minus |
