FMO11267.5prime Sequence
1142 bp (1014 high quality bases) assembled on 2011-12-02
> FMO11267.5prime
CAGTCGACATGAAAGAAACTCTAAGCTCAAAGGTGCCAACAAGAATAGGA
GTAACGTTTGTGTCTGAATCGGATCCAAAGAAAAAGTTCAAAAGTTCGCC
ATCAACGTCGAGCTCAACAATATCAACGGCGACAATAACAAGCACAACAA
CAACAACAACAACAACCGCATCGCCCCCACCGCCCCAAACTTCGTATGTG
ATTAAATGTCTATTGAAGACCGCTCGTTTTATGTGGCAAGTGACGACAAT
ACCCTCTAAAATCGGTGATACCATTGGTACCCTGTACCGTTATGCTCAGG
ATTCAGTTGATAGTTTTCTATGCGTAGCTGGCAAGGCCCGTCGCAAGGAA
CGCGATGGCGATCAAAATTCAACAGACACCAAATTGTATTTGGAGGAAAG
TGTCCTAGAACGTAAATTACCTGAAGCTGATCTCAAAGCCCTAGTGGATC
TTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACACCCTCGCT
CTATTTGAGCACGTGAATTTGGTCTATGGAACTATTAGTGAATTTTGTAC
ACAATCCGGTTGCGCTGACATGACCGGACCCGGCAACAGAACGTACTTAT
GGTTCGACGAGAAGGGCAAGAAGACGCGCGTCGCAGCACCACAGTACATC
GACTATGTGATGACGTTCACCCAGAAGACGGTCAGCGATGAGTCGATATT
CCCAACCAAATACGCCAACGAGTTCCCCGGCTCGTTCGAGTCGATTGCGC
GGAAGATACTACGCTTGCAATTTCATGTGATAGCGCATCTGTATGCGGCG
CATTTCAGAGAAATCGCGCTGCTCGGCTTGCACACCCATCTTAATCTGAC
TTTCGCGCACCTCACCGCACTGCACCGGCGCTTCAATTTGATCGACGAGA
AGGAGACGGACGTGCTGCGCGACCTTGAGTTGGCCCTGCGCCTCACCGAC
GATACCGTGGATGCCAGGATGCTTACCTCCACGACGTTCGTCGGTTCATT
GACCCCTCCCCACTTCGGGATTCTCCAGCATCAGTCCGCTGCAACAGCAG
CAGCAACACCACAACAGCAGCAGCAACAGCACCTCTCCCGGGCGGAGCTT
CCCGTTCATTCACAGGCACACATGGGCAAGCACACTTCCGCC
FMO11267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mob2-RE | 1976 | CG11711-RE | 178..1250 | 9..1085 | 5120 | 98.8 | Plus |
| Mob2-RB | 3466 | CG11711-RB | 129..1201 | 9..1085 | 5120 | 98.8 | Plus |
| Mob2-RC | 1816 | CG11711-RC | 339..1090 | 330..1085 | 3515 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11525022..11525516 | 1085..587 | 2080 | 97.2 | Minus |
| 3L | 28110227 | 3L | 11527455..11527777 | 331..9 | 1615 | 100 | Minus |
| 3L | 28110227 | 3L | 11527182..11527343 | 492..331 | 810 | 100 | Minus |
| 3L | 28110227 | 3L | 11525580..11525676 | 589..493 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:27:18 has no hits.
FMO11267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:10 Download gff for
FMO11267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mob2-RB | 121..1203 | 9..1097 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:21 Download gff for
FMO11267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mob2-RB | 129..1211 | 9..1097 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:09 Download gff for
FMO11267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mob2-RB | 129..1211 | 9..1097 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:09 Download gff for
FMO11267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11525012..11525513 | 590..1097 | 96 | <- | Minus |
| 3L | 11525580..11525676 | 493..589 | 100 | <- | Minus |
| 3L | 11527182..11527342 | 332..492 | 100 | <- | Minus |
| 3L | 11527455..11527777 | 9..331 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:21 Download gff for
FMO11267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11518680..11518776 | 493..589 | 100 | <- | Minus |
| arm_3L | 11520282..11520442 | 332..492 | 100 | <- | Minus |
| arm_3L | 11518112..11518613 | 590..1097 | 96 | <- | Minus |
| arm_3L | 11520555..11520877 | 9..331 | 100 | | Minus |
