FMO11270.5prime Sequence
494 bp (413 high quality bases) assembled on 2011-12-02
> FMO11270.5prime
CAGTCGACATGTCATTTACGCTGACGAATCAGAGCTTAATCCGATTGGAG
AGCTCCAAGGACGACGATGAATGGAATCGGACATTAATGTTCTTCAATGT
AGATATTTCGAGCGGAGTGTGCCGTGACCACCAAAACAAGATTTCGCAGC
CACGGTCCTCCGTTTGCAATGGAAAGCGACGAGCTCCCGGCGGAGGATTG
GCCAATCCAATTACGGAGAGTGTGATGTCATTTGTAGCAGCCAATAAATT
CTATGCTCGCGAACATTCAAATTTTGATCATGGGAATTATACGCCACGAA
CTTCTGGCCGGCGAAGAGATAACTTTGCCTATTCCGACAGACGTCGTCAT
TTTTATCATAGACCAATTAAAATCCGGACGATTCGTGCCGAATAGGTTTA
GTTTCCCCATCCTCCTCGGCCGATTCTACGGGTTACTATGAGAGTAAAAG
GATCACTTTCCAACTTTAAAACGGGAAGAGGTTGATAACTTTAC
FMO11270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:26:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33125-RC | 3930 | CG33125-RC | 124..612 | 9..492 | 2155 | 97.1 | Plus |
| CG33125-RB | 3995 | CG33125-RB | 124..612 | 9..492 | 2155 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2651785..2652062 | 454..178 | 1185 | 97.5 | Minus |
| 2L | 23513712 | 2L | 2652122..2652291 | 178..9 | 850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:26:13 has no hits.
FMO11270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:05 Download gff for
FMO11270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33125-RB | 1..467 | 9..472 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:50 Download gff for
FMO11270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33125-RB | 79..545 | 9..472 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:39 Download gff for
FMO11270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33125-RB | 124..590 | 9..472 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:39 Download gff for
FMO11270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2651765..2652062 | 178..472 | 96 | <- | Minus |
| 2L | 2652123..2652291 | 9..177 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:21:50 Download gff for
FMO11270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2651765..2652062 | 178..472 | 96 | <- | Minus |
| arm_2L | 2652123..2652291 | 9..177 | 100 | | Minus |
