FMO11278.5prime Sequence
1114 bp (1017 high quality bases) assembled on 2011-12-02
> FMO11278.5prime
CAGTCGACATGCCATCGCCAACGGGAGTCTTTGTGCTAATGATCCTCACC
CACCTGAGTTTTGGTTTGGGCCAGGTGCGAAACGAGGACCAGCTGCTGAT
GGTTGGCCAGAATGGCGATCTCGACAGCAGCAATCCTGCGATTCACCACC
AGCAACACCAACAGCACCAACAACACCAGCAGCATCAGCAGCACCAGAGC
AATCACAATCTGAACAACGGGAACATGAACAGCACGATACTGAATACACT
GATGGGAAACAATGCTGGTCAGGTGGTGAACAGTTCCCCGGGTGGCGGCG
GATCCATGATCAACCAATTGGGCAGCAGTACATCGAGTGTACCCTCGGTG
ATTGGAGGCGGCGTGGGGTCCGTGGGAAACCCCTGGCATTCGGCAGTCGG
ACTCGGAGTTCCTGGCAACGGAATGGGGCTACCATCGAGCCACGGTCTCG
GCGGCAACATGGGCTCCCATCCTCATGGACACGCTCTGGCTGGACTGGCC
AAATTGGGCATCATAGTGCCGGGCGGCCAAGGATTACCTGGGAATCTGGG
ATACGGCGGGACCATGCTGAACGGCGGAGGAGTTGGAGGTGCTGCCGGAA
TGGGCCTAGGAATCGGCTCCAACACTAATAACATGGATATGCAGCAAGGC
CTTTACAACGAACACTTCATTTCGGAGCACACGGTGATGGCGGTGTTCAC
TTCGCAGGGCCAAGTGGGTGGACCCTGCAGATACATGCCTGCCACGCGGC
GTCAGAACCACCAGTGTCGCAAGGAGACGGGATTGCCGGGAACCCTTAGC
GAGGCCCGCCGTCTGGCCACCACCCACTGCGAGGAACAGTTCCGCTACGA
CCGCTGGAACTGCTCGATCGAGACGCGCGGAAAGCGGACATCTTCAAGAG
CTCTACAAGGAGACTGCCTTCGTCCACGCGCTCACAGCGGGCCGCCATGA
CCCACTCGATTAGCCAGGGCCTGTGCCGAGGGACGTATGACCAAGTGCAG
CTGCGGCCAAAAAGCACAACAGGAAGGCGCAGACTCAGTGGGGCGCTGCA
TGACAATCTGGAGCCCGCAAGCGGGTGACCGCAGCTTCCTTGACTGGCCG
GGTGGTGTATGGGG
FMO11278.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt4-RB | 2938 | CG4698-RB | 1163..2270 | 9..1107 | 5130 | 98.2 | Plus |
| Wnt4-RA | 3367 | CG4698-RA | 1163..2270 | 9..1107 | 5130 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7275360..7276009 | 658..9 | 3250 | 100 | Minus |
| 2L | 23513712 | 2L | 7256803..7257260 | 1107..659 | 1600 | 95.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:16 has no hits.
FMO11278.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:14 Download gff for
FMO11278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt4-RA | 1153..2273 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:56 Download gff for
FMO11278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt4-RA | 1153..2273 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:34 Download gff for
FMO11278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt4-RA | 1156..2276 | 1..1114 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:34 Download gff for
FMO11278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7256833..7257260 | 659..1079 | 96 | <- | Minus |
| 2L | 7275360..7276016 | 1..658 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:56 Download gff for
FMO11278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7256833..7257260 | 659..1079 | 96 | <- | Minus |
| arm_2L | 7275360..7276016 | 1..658 | 99 | | Minus |
