Clone FMO11289 Report

Search the DGRC for FMO11289

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:112
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31702-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11289.5prime Sequence

1148 bp (1042 high quality bases) assembled on 2011-12-02

> FMO11289.5prime
CAGTCGACATGAGTGGGAGGAGTATTCAACATTCCATTGAAGTTGGGAAA
GAGCGCAGGGACATGCGACACGAAGAGGATTGCAGAATGGATGACCGCTT
ACGGACAAGACGTAAGATCGCAAATAAACTGGAGTCTGGTGGCAAAACAG
CACATGCTTTTGAGCGATTATTGGCAATTCGCACCATTAAATTGAGCAAG
GGAAAATGTTCCGAAGACAGTGCAGAGCAGACGAAGTCTAGTGATGATTG
CAAGGCACAAACGCGTAAGGATGTAAATATCGAGGTCAAAGAGACTTATT
CCGGCGATTCCTCGCCTAACAGTGAGAGCGAGAATACAGCCCAAAACGAT
CCGCAAATGAACGTAGAAAGCGAAGAACGCGTATCCAACCTGGAACAGCT
GAGTCGAGCAGTGTTAAAACGGAACGACATAAAGAACTTACTGGGTAAAC
CTATTTTCGCGGAGGCTGTGATCGGATCCTTTGTGCGGATAAATGTTGGA
AAAGTCTACTCCATCTACGAAACTATTGCTCTGCATCAGGACAGTAAGGA
CTACCGGGTAGACGGTAAGCGTACCAATCTGACCCTGGTCTTGAGGTGCG
GTTCCGAAAAGCGTTATTCACGTATAGACGTGGTTTCAAATCAGCCAATT
ACACAAAAGGAATTCTTGTTGTGGTTGGAAACCAATCTGCGCAATCGATG
CACTTTACCAACGCTTAATGACATCGCCAAAAAACAGGTGCAGGTAAAAA
ATGCCTGTAAATACTCGTACACTGAAACTGATGTGGAGAAGCTGATTCAA
GACAAAAAGAAGCTGGTATAAAACAGAATGCCGCTTACAGAAAATTAGTC
TAATTATAGAGCGTGATATGGCAGCGGGTATGAACGACGTGGAAAAAGTG
CAAGTGTTGGAGAAGAAAATCCTTAGAGATCGACGAGGAACCCAGACCCC
AGATCGAAAAATCTGGCCAGCATCGGTACCAAGTCCTTAGTTCTACACGC
GGGTTCATGTGCCTACATTTACCGGCACGAGTTGGGTTGTGCCTTCGGCG
CAAAAGTTCCTTTGTTTAGCGACCGCGAGCCGACAACATGGATGAAAGTA
TATTGCCACGAAGTATAAAAAATGCTGTAAGTCAGTCGCCATTGCAAA

FMO11289.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31702-RA 1710 CG31702-RA 76..1222 9..1139 5120 97.5 Plus
CG31703-RA 1727 CG31703-RA 97..1243 9..1139 5060 97.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22071219..22072290 9..1072 4835 98.2 Plus
2L 23513712 2L 22103234..22104305 1072..9 4775 97.9 Minus
2L 23513712 2L 22066516..22067157 86..727 3015 98 Plus
Blast to na_te.dros performed on 2014-11-27 00:17:19 has no hits.

FMO11289.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:27 Download gff for FMO11289.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31702-RA 60..1213 4..1139 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:13 Download gff for FMO11289.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31702-RA 69..1222 4..1139 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:16 Download gff for FMO11289.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31702-RA 69..1222 4..1139 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:16 Download gff for FMO11289.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22071212..22072365 4..1139 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:13 Download gff for FMO11289.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22071212..22072365 4..1139 97   Plus