FMO11289.5prime Sequence
1148 bp (1042 high quality bases) assembled on 2011-12-02
> FMO11289.5prime
CAGTCGACATGAGTGGGAGGAGTATTCAACATTCCATTGAAGTTGGGAAA
GAGCGCAGGGACATGCGACACGAAGAGGATTGCAGAATGGATGACCGCTT
ACGGACAAGACGTAAGATCGCAAATAAACTGGAGTCTGGTGGCAAAACAG
CACATGCTTTTGAGCGATTATTGGCAATTCGCACCATTAAATTGAGCAAG
GGAAAATGTTCCGAAGACAGTGCAGAGCAGACGAAGTCTAGTGATGATTG
CAAGGCACAAACGCGTAAGGATGTAAATATCGAGGTCAAAGAGACTTATT
CCGGCGATTCCTCGCCTAACAGTGAGAGCGAGAATACAGCCCAAAACGAT
CCGCAAATGAACGTAGAAAGCGAAGAACGCGTATCCAACCTGGAACAGCT
GAGTCGAGCAGTGTTAAAACGGAACGACATAAAGAACTTACTGGGTAAAC
CTATTTTCGCGGAGGCTGTGATCGGATCCTTTGTGCGGATAAATGTTGGA
AAAGTCTACTCCATCTACGAAACTATTGCTCTGCATCAGGACAGTAAGGA
CTACCGGGTAGACGGTAAGCGTACCAATCTGACCCTGGTCTTGAGGTGCG
GTTCCGAAAAGCGTTATTCACGTATAGACGTGGTTTCAAATCAGCCAATT
ACACAAAAGGAATTCTTGTTGTGGTTGGAAACCAATCTGCGCAATCGATG
CACTTTACCAACGCTTAATGACATCGCCAAAAAACAGGTGCAGGTAAAAA
ATGCCTGTAAATACTCGTACACTGAAACTGATGTGGAGAAGCTGATTCAA
GACAAAAAGAAGCTGGTATAAAACAGAATGCCGCTTACAGAAAATTAGTC
TAATTATAGAGCGTGATATGGCAGCGGGTATGAACGACGTGGAAAAAGTG
CAAGTGTTGGAGAAGAAAATCCTTAGAGATCGACGAGGAACCCAGACCCC
AGATCGAAAAATCTGGCCAGCATCGGTACCAAGTCCTTAGTTCTACACGC
GGGTTCATGTGCCTACATTTACCGGCACGAGTTGGGTTGTGCCTTCGGCG
CAAAAGTTCCTTTGTTTAGCGACCGCGAGCCGACAACATGGATGAAAGTA
TATTGCCACGAAGTATAAAAAATGCTGTAAGTCAGTCGCCATTGCAAA
FMO11289.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31702-RA | 1710 | CG31702-RA | 76..1222 | 9..1139 | 5120 | 97.5 | Plus |
CG31703-RA | 1727 | CG31703-RA | 97..1243 | 9..1139 | 5060 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22071219..22072290 | 9..1072 | 4835 | 98.2 | Plus |
2L | 23513712 | 2L | 22103234..22104305 | 1072..9 | 4775 | 97.9 | Minus |
2L | 23513712 | 2L | 22066516..22067157 | 86..727 | 3015 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:17:19 has no hits.
FMO11289.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:11:27 Download gff for
FMO11289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31702-RA | 60..1213 | 4..1139 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:13 Download gff for
FMO11289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31702-RA | 69..1222 | 4..1139 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:16 Download gff for
FMO11289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31702-RA | 69..1222 | 4..1139 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:16 Download gff for
FMO11289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22071212..22072365 | 4..1139 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:13 Download gff for
FMO11289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22071212..22072365 | 4..1139 | 97 | | Plus |