FMO11290.5prime Sequence
1083 bp (952 high quality bases) assembled on 2011-12-02
> FMO11290.5prime
CATTCGACATGCCGTTTGTGACGCCCCGTGCGGGGACAAGCAGTGCAAGC
AGTGCGCCCGGCGGACGCACCACGTTCCGTCCGCCATGGGTGAAGGACGA
CGGCGGCACCAGTGGCACCAGCAGTACCACAAAGCCCACTGCCACTCCGT
GGGCAAAGAAAACAGCGACGACGACGACCGCCTCTCCGGCAACAAAGGAA
AATGGAGAAAAGCCGACTGTGGCCAAACCAAAAGCAACTGCTACCACGAC
TGCAGCCGCGAGGAAGACTTCGACCCCTGAACCGGCTAAGAAGACGATAG
AGCCTGTAAAGAAATCTTCACTGGCCACAAGCACAACGGCGGCCAAGAAG
ACACCAGAACCCGTAAATACCAAGAAAGCACCGGAGCCAATCAAGAAAGT
GGCGCCCACCGTGGGGCCCAAGAAGCCAGTAGCCACCACTTCAGCGCTCA
AAAAGAAGAAGGAGCCGACACCACCACCCGAATCCTCCTCCGAGGAAGAA
GAAAGCGAGGAGGAGGAAGAGACCGAAGAGGAAACCGAGTCTGAGGAGGA
GGAAAGCGAAGAGGAAAGCGAGTCCGAAGAGGAGGAGAGCGAGGAAGAGG
ACACCACCGTGGACGAGAAGGTGCCCGAGCACGTGAAGAAGGCGGCCCAA
TTGCGACCCACCACCGTGAACAAGAAGCCGGAACCGGAAAGTGAGTTGAC
CCAACGTTTTACCATGGAGAAACCAAATTACGCAGCGTGGTGGTCAAGCG
GGATAAGTCCTTGAAAAAGATGGCCACCGAAGACGACGACGAGGCCGAGG
AGGGCGAAACGGAGGAGGAGCGCGACCGGCGGCGACGTTTCAAAATTAGA
GAAGCCCAAGCTGCGGCATGTCAAGCGCGAGGAGAAGCCTTTTGCCCAGC
AAGAGCACCGACGACCTGGCCCAAAATCCGGCCCGTGCCTCAGAAAGGTA
CCCAAGGATCGATGAGCCTCCTCAGGACCCGAAAGAAGGAGTCAAATCCC
GGAGTTCACGACCAAGAACCCTAACGCAAAGCGTCATAAAAGCGCGAGCG
AGCATCCAGGTCGTCCGCCCTGCCGCCGCTGCC
FMO11290.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sals-RF | 3272 | CG31374-RF | 235..1308 | 5..1083 | 4860 | 97.5 | Plus |
| sals-RG | 3294 | CG31374-RG | 257..1330 | 5..1083 | 4860 | 97.5 | Plus |
| sals-RD | 3314 | CG31374-RD | 277..1350 | 5..1083 | 4860 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11447134..11448170 | 1049..5 | 4525 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:55 has no hits.
FMO11290.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:18 Download gff for
FMO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sals-RD | 271..1347 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:22 Download gff for
FMO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sals-RD | 274..1350 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:52 Download gff for
FMO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sals-RD | 274..1350 | 1..1083 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:52 Download gff for
FMO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11447122..11448173 | 1..1060 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:22 Download gff for
FMO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7272844..7273895 | 1..1060 | 97 | | Minus |
