Clone FMO11291 Report

Search the DGRC for FMO11291

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:112
Well:91
Vector:pMK33-CFH-BD
Associated Gene/Transcriptcdc14-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11291.5prime Sequence

1124 bp (1023 high quality bases) assembled on 2011-12-02

> FMO11291.5prime
CAGTCGACATGTTGGACGATGACAACTCAGATCTGCTGGTCTGTGCATCG
GAGATGCAGGAAGACCGATTATACTTTGTGGCCTTCAAGAAGAACATCAA
GCCAAAGAACACGGTCAACACCCACTACTTCAGCGTCGATGAGGAATTCA
TCTATGAGAACTTCTACAATGACTTTGGTCCGCTCAACATATGCATGCTC
TACAGATACTGCATGAAACTGAACACCAAGCTGAATGCCAAGTGCCATGC
CAACAAAAAGATAGTTCACTACACCTCCATGAATCCGGCCAAGCGGTTGA
ACGCGGCCTATCTGATTGGTTCGTATGCAATAATCTACCTTAACAAGACA
CCACAAGAGGCATATCGGCCGCTGGTCGCTGGCGAGATTCCTGCCTACAC
GCGCTTTTGTGACGCCAGCTACGGACCTAGCAACTTTAAGATTTCGTTGC
TGGACTGCCTGAATGCTGTGCACAAAGGCCTGCAGGCGGGATTCTTTAAT
TTCAACGACTTTGATGCTGAGGAGTATGAGTATTTCGAGCGCGTGGAGAA
CGGCGACTTTAACTGGATTGTGCCCCAAAAGTTTATAGCGTTTTGCGGGC
CCCATCAGAAGAGCAAGACGCTGCCGAATGGATATCCGTGCCATGCACCT
GAGCGCTACTTTAGCTATTTTCGGGATAATAATGTGACAACAGTGATTCG
GCTGAATGCCAAAGTCTATCACGCATCGTCCTTTGAGAACGCTGGTTTCG
ATCACAAGGATTTGTTCTTCATCGATGGCAGCACGCCCAGCGATGCCATC
ATGAAGAAGTTCCTCTCCATTTGTGAGACGACAAAGGGAGCCATTGCAGT
TCACTGCAAAGCGGGCTTGGGGACGCACGGGCAGCCTGATAGGGGCATAT
ATCATGAAGCATTACGGATTCACTGCTCTGGAGGCCATAGCCTGGCTAAG
CTTTGCCGGCCGGGATCGTGATTGGACATCAGCAGCAGTGGATGGAAGAC
AACAAGCTGGCTGTGGTCGGAGGGCGAACGATGCGCGGCGCACTTCGCTT
CCATTCCTCAGCATACGTACGTATTCAACACCCTGGAACGAGAAAAAACT
GGCCTCTGGCCTGCCCGCGAATTC

FMO11291.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
cdc14-RE 3305 CG7134-RE 591..1696 9..1106 5180 98.6 Plus
cdc14-RD 4568 CG7134-RD 591..1696 9..1106 5180 98.6 Plus
cdc14-RC 3985 CG7134-RC 591..1696 9..1106 5180 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7805853..7806523 999..330 3210 99.6 Minus
2L 23513712 2L 7806653..7806924 333..62 1345 99.6 Minus
2L 23513712 2L 7806990..7807044 63..9 275 100 Minus
2L 23513712 2L 7805675..7805782 1106..1004 205 88 Minus
Blast to na_te.dros performed on 2014-11-27 00:29:05 has no hits.

FMO11291.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:19 Download gff for FMO11291.5prime
Subject Subject Range Query Range Percent Splice Strand
cdc14-RC 577..1705 1..1124 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:27 Download gff for FMO11291.5prime
Subject Subject Range Query Range Percent Splice Strand
cdc14-RC 583..1711 1..1124 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:56 Download gff for FMO11291.5prime
Subject Subject Range Query Range Percent Splice Strand
cdc14-RC 583..1711 1..1124 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:56 Download gff for FMO11291.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7805853..7806523 330..999 99 <- Minus
2L 7806657..7806922 64..329 100 <- Minus
2L 7806990..7807052 1..63 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:27 Download gff for FMO11291.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7805853..7806523 330..999 99 <- Minus
arm_2L 7806657..7806922 64..329 100 <- Minus
arm_2L 7806990..7807052 1..63 93   Minus