FMO11291.5prime Sequence
1124 bp (1023 high quality bases) assembled on 2011-12-02
> FMO11291.5prime
CAGTCGACATGTTGGACGATGACAACTCAGATCTGCTGGTCTGTGCATCG
GAGATGCAGGAAGACCGATTATACTTTGTGGCCTTCAAGAAGAACATCAA
GCCAAAGAACACGGTCAACACCCACTACTTCAGCGTCGATGAGGAATTCA
TCTATGAGAACTTCTACAATGACTTTGGTCCGCTCAACATATGCATGCTC
TACAGATACTGCATGAAACTGAACACCAAGCTGAATGCCAAGTGCCATGC
CAACAAAAAGATAGTTCACTACACCTCCATGAATCCGGCCAAGCGGTTGA
ACGCGGCCTATCTGATTGGTTCGTATGCAATAATCTACCTTAACAAGACA
CCACAAGAGGCATATCGGCCGCTGGTCGCTGGCGAGATTCCTGCCTACAC
GCGCTTTTGTGACGCCAGCTACGGACCTAGCAACTTTAAGATTTCGTTGC
TGGACTGCCTGAATGCTGTGCACAAAGGCCTGCAGGCGGGATTCTTTAAT
TTCAACGACTTTGATGCTGAGGAGTATGAGTATTTCGAGCGCGTGGAGAA
CGGCGACTTTAACTGGATTGTGCCCCAAAAGTTTATAGCGTTTTGCGGGC
CCCATCAGAAGAGCAAGACGCTGCCGAATGGATATCCGTGCCATGCACCT
GAGCGCTACTTTAGCTATTTTCGGGATAATAATGTGACAACAGTGATTCG
GCTGAATGCCAAAGTCTATCACGCATCGTCCTTTGAGAACGCTGGTTTCG
ATCACAAGGATTTGTTCTTCATCGATGGCAGCACGCCCAGCGATGCCATC
ATGAAGAAGTTCCTCTCCATTTGTGAGACGACAAAGGGAGCCATTGCAGT
TCACTGCAAAGCGGGCTTGGGGACGCACGGGCAGCCTGATAGGGGCATAT
ATCATGAAGCATTACGGATTCACTGCTCTGGAGGCCATAGCCTGGCTAAG
CTTTGCCGGCCGGGATCGTGATTGGACATCAGCAGCAGTGGATGGAAGAC
AACAAGCTGGCTGTGGTCGGAGGGCGAACGATGCGCGGCGCACTTCGCTT
CCATTCCTCAGCATACGTACGTATTCAACACCCTGGAACGAGAAAAAACT
GGCCTCTGGCCTGCCCGCGAATTC
FMO11291.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cdc14-RE | 3305 | CG7134-RE | 591..1696 | 9..1106 | 5180 | 98.6 | Plus |
cdc14-RD | 4568 | CG7134-RD | 591..1696 | 9..1106 | 5180 | 98.6 | Plus |
cdc14-RC | 3985 | CG7134-RC | 591..1696 | 9..1106 | 5180 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7805853..7806523 | 999..330 | 3210 | 99.6 | Minus |
2L | 23513712 | 2L | 7806653..7806924 | 333..62 | 1345 | 99.6 | Minus |
2L | 23513712 | 2L | 7806990..7807044 | 63..9 | 275 | 100 | Minus |
2L | 23513712 | 2L | 7805675..7805782 | 1106..1004 | 205 | 88 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:29:05 has no hits.
FMO11291.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:19 Download gff for
FMO11291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cdc14-RC | 577..1705 | 1..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:27 Download gff for
FMO11291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cdc14-RC | 583..1711 | 1..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:56 Download gff for
FMO11291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cdc14-RC | 583..1711 | 1..1124 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:56 Download gff for
FMO11291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7805853..7806523 | 330..999 | 99 | <- | Minus |
2L | 7806657..7806922 | 64..329 | 100 | <- | Minus |
2L | 7806990..7807052 | 1..63 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:27 Download gff for
FMO11291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7805853..7806523 | 330..999 | 99 | <- | Minus |
arm_2L | 7806657..7806922 | 64..329 | 100 | <- | Minus |
arm_2L | 7806990..7807052 | 1..63 | 93 | | Minus |