FMO11292.5prime Sequence
1146 bp (1023 high quality bases) assembled on 2011-12-02
> FMO11292.5prime
CAGTCGACATGGCACTGGTGCACACTTTCCTGGGCACCTGGGAGATTGTC
TGCTGCACCTTCGAGGGAAAACGAGAGCTGTCCGGTCTAGAGGGCATCAA
GTTCCGCCTGGATGACACCAGTGACATTACGTGGTACAACGATCTGGTCA
GCCCGCTTCCGGAATCGAAAGACTGTGGCAACTTTTGCGAATCGGCCAGT
GTTCTCTTCAGCTGCGAGACCTTCGATGTCCACGAGATCAATCCGCGCCT
GGTCTTCGGCGCCTTTGCCGGCCACAGCATCGAGTTCAGCACCAACACCT
TAACGCCGACTGATACGCTGGTTCTCAGCTGCGAGAACTGGTATGCCGTG
GAGTGCAAGCGCCTGCAGGACAATCAAGCCGCTGGTCAGGAGAAGCAACT
GAGCTTCGGCGAGGCCCTACAGGAGTCCTACTTTAGCGATGTGATGGTGA
AGAGCTCCAGTGGCCTGGAGTACGCCCTGCACGCCTCCATACTGCGACTC
AATGGCTTCGATTGCAGCATGTGCGTGAACAGTGCCCCGTCATCGGCTGC
CGCTCGTCCTGCGGCCAGGTCCTGTCACAGTGGTCCGAACACCCCGAATC
CCATACGCATCTCCGTGGCGCCGGCGTCCAACGACGATGGGCATGAGAAG
TCCCTGCCGCGTCTGAATCTCTCGCCCATCTATCTGCAACCGCCGTGCGA
CTTTCAGACCATGCCCTCGTCCGGATTGGGCGCCCAGCGCGTGCATCAGT
TCAGCAGCAGCTTCAATTGCCTGAGCAACGGCAACGCCGGGGACTCGGAG
TCGGTGGTCAGGACCACGGGTCTGCTGAGCCTCGAATGTGGCGGCGGTGG
CGGTATGTACCGTCTGCCGCCCACTTCGCATTCGGATTCGCACCTGGAGA
CATCGCAGTCGCATTGCAGAACATCTTTAACTTCTGCCAGGACCTGATGC
TGCAGCCAACGCCCCACTCCCATGCCCGCCGACCACAGGTCTGGCCATTT
GGCAGCATCCGGAGGCCACCACTATCGGCCGGTACCGGTGCTCGCAAGTC
CCTCCGCCTTTTCCAAGCTTCATGGGAACGCCCGCCATCGGTCGCGCCGG
AACGCCCGGGGGGCGGTGCTGGGTATCTGGCCACTCCGTGCGTGGC
FMO11292.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7058-RB | 4548 | CG7058-RB | 295..1412 | 5..1133 | 5130 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18807474..18808208 | 291..1027 | 3490 | 99.5 | Plus |
| X | 23542271 | X | 18807204..18807400 | 94..290 | 985 | 100 | Plus |
| X | 23542271 | X | 18807102..18807153 | 43..94 | 260 | 100 | Plus |
| X | 23542271 | X | 18806988..18807027 | 5..44 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:29:12 has no hits.
FMO11292.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 09:12:19 Download gff for
FMO11292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7058-RB | 291..1376 | 1..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:32 Download gff for
FMO11292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7058-RC | 291..1376 | 1..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:59 Download gff for
FMO11292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7058-RB | 291..1376 | 1..1095 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:59 Download gff for
FMO11292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18806984..18807027 | 1..44 | 93 | -> | Plus |
| X | 18807104..18807153 | 45..94 | 100 | -> | Plus |
| X | 18807205..18807400 | 95..290 | 100 | -> | Plus |
| X | 18807474..18808286 | 291..1109 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:32 Download gff for
FMO11292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18701017..18701060 | 1..44 | 93 | -> | Plus |
| arm_X | 18701137..18701186 | 45..94 | 100 | -> | Plus |
| arm_X | 18701238..18701433 | 95..290 | 100 | -> | Plus |
| arm_X | 18701507..18702319 | 291..1109 | 97 | -> | Plus |
