FMO11316.5prime Sequence
1002 bp (962 high quality bases) assembled on 2011-12-09
> FMO11316.5prime
CAGTCGACATGCAGTGCGACATACAGACAAGCCGACGCGAATGCCCGATA
GAACCGACCACAGGCATGAATCGTAGGGGTTTGAACGCTGGCAATACGAT
GACTTCTCAAGCGAACATTGACGACGGCAGCTGGAAGGCGGTCTCCGAGG
GCGGATCAATGCTGCCCGCGTCCAATTCGGCGGTCCTCAATCCGGACGGG
AGCAACCAGAGCGGCTTCGCGCAGGGCGGCCTGCCGTACAACTCGGCCGG
GAATCCGTACCCGCCCGCCGGCCAATCCTCGCCAGCCGGCAACCAGTCCA
TCGTGTTCCAGAACTCCAACCAGCCTGGCTCGAACACACCTCAGTATACC
TCCTCACCTGCTCCCTCGGGCTCATCGACACCCGGACCTGTTGGTGCGCA
GAACATTCCCGGCAACTACCCGCAGTCGGCGACGGCGGGCAATTTCAATG
GTCCAGTTGGCGGGCCCTTCGGCTCGCCATCCTCGGGACTCGGCCAGTTC
AGCCGGCCGGCCAGCTCGGGCACTCCGTTTAACAGTGGCCAGGCCGGGCA
CTTCTCATCGCCCACGGTATTCAGCGTTGGCGGGCAATTCAATCCGATGC
CGCCGGCGTCGCCATTCGGCCACGGAGGCAACCACCCGATGATGGGCGGG
CCGCAGCAGATGGAACGCATCGACCAGGGCTTCAGGCGGCACAATTCCTA
CTTTAGCCACACGGAACACCGCGTCTTTGAGCTAAACAAGCGGCTGCAGC
AGCGCAACGAGGAGAGCGACAACTGCTGGTGGGACTCGTTTACCACGGAG
TTCTTCGAGGATGATGCCCGGCTGACCATTCTGTTCTGCCTGGAGGACGG
ACCGAAGCGGTACACCATCGGGCGCAACGCTCATCCCGCGCTTCTTCCGC
AAGCATTATACGAAGGGCGGCGTTTCCGAACTGGTACTTTCACCTGAAAG
CCTGGCCAAGGGATGTGTTCCACACAACACCTCCATCCGTTTGGACTGCA
CC
FMO11316.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chi-RB | 2125 | CG3924-RB | 69..1049 | 9..999 | 4550 | 98.1 | Plus |
| Chi-RA | 2156 | CG3924-RA | 122..1080 | 31..999 | 4440 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24032703..24033576 | 901..27 | 4310 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:42:34 has no hits.
FMO11316.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:13 Download gff for
FMO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chi-RB | 65..1005 | 3..951 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:31:34 Download gff for
FMO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chi-RB | 65..1005 | 3..951 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:04 Download gff for
FMO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chi-RB | 65..1005 | 3..951 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:04 Download gff for
FMO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24032658..24033572 | 31..951 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:31:34 Download gff for
FMO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19920181..19921095 | 31..951 | 99 | <- | Minus |
