FMO11319.5prime Sequence
1130 bp (1019 high quality bases) assembled on 2011-12-09
> FMO11319.5prime
CAGTCGACATGGATAATTCCAATGGAATCCACTACATTGAGCTAACCCCA
AATCCCATACGATTTGATGCTGTCAGCCAACTAACCAATGTGTTTTTCGA
TGACTCCAACAAGCAGATATTTGCTGTTCGGTCTGGAGGAGCTACTGGTG
TGGTGGTCAAAGGTCCTGGATCTCCCGACGATGTCGTCATCTCCTTTTGC
ATGAGCGACCGTGGCGGTGCCATAAGGTCCATTAAGTTCTCGCCGGACAA
CCAAATCTTGGCCGTTCAGCGAAAGGAGAATTCCGTGGAGTTCATATGTT
TTCAGGGAGATCAGCCTCTGCTGCAGGACATCATTACCCACCAGGTGAAG
ACTCTGATCCATGGCTTTGTTTGGGTCCACAATCGGGAGGTGGCCCTGAT
TTCGAATACCGGCGTGGAGGTCTACACCGTAGTTCCTGAGAAGCGACAGG
TGCGCTCTGTGAAATCCCTGAGCATTGGCATCAAGTGGTTCGCCTGGTGC
TGCGATGCCAATGTGGCTCTACTGTGCACCAGCGAAGGAAACTCCCTGAT
TCCGGTGCTGGTCAAGCAGAAAGTAATCACCAAGCTGCCCAAAGTGGACT
TGGGCAATCCAAGTCGCGATGTCCAGGAGAGCAAGGTCACCTTAGGCCAA
GTTTACGGCGTGCTGGCTGTGCTTATCCTCCAGTCAAATAGCACCACCGG
ACTGATGGAAGTCGAGGTGCACTTGCTCAATGGACCGGGCTTGGCTCCAC
GCAAGTGCCATGTGCTCCGCTTAAGTCTGCTTGGTCGCTTCGCCATCAAC
ACGGTGGATAATCTGATTGTGGTGCACCATCAAGCTTCGGGCACTTCGCT
GCTATTCGACATCTCCCTGCCCGGGAGAGGTGATCAATGAAATAACCTAT
CATACACCCCATAACTCCAAGGGCGCTCCATCAAACCGTTTGGCCCTGAA
ACTGCCCTCACTTTCGCCTGATGGAAAAATCTTGCAGTGCGAGTTGTATT
CCACGCACTGGGTACTGTTCAGCCAATATTGTATCGAATGCCAAGTTTGG
TTGCATGTATGTTGAACCTCTGCATGAACCATGGTGCCAACTGATTTCCG
AATCGCATCGACTTACAAATCCTGGCTGCA
FMO11319.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8270-RB | 2170 | CG8270-RB | 81..1190 | 9..1117 | 5160 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6488928..6489413 | 115..600 | 2415 | 99.8 | Plus |
3L | 28110227 | 3L | 6489470..6489862 | 601..997 | 1770 | 98.7 | Plus |
3L | 28110227 | 3L | 6488761..6488872 | 9..120 | 545 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:42:53 has no hits.
FMO11319.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:05:15 Download gff for
FMO11319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8270-RB | 76..1204 | 1..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:31:51 Download gff for
FMO11319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8270-RB | 71..1199 | 1..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:17 Download gff for
FMO11319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8270-RB | 71..1199 | 1..1124 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:17 Download gff for
FMO11319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6489470..6489862 | 601..997 | 98 | -> | Plus |
3L | 6488751..6488868 | 1..116 | 96 | -> | Plus |
3L | 6488930..6489413 | 117..600 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:31:51 Download gff for
FMO11319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6481851..6481968 | 1..116 | 96 | -> | Plus |
arm_3L | 6482030..6482513 | 117..600 | 99 | -> | Plus |
arm_3L | 6482570..6482962 | 601..997 | 98 | -> | Plus |