FMO11321.5prime Sequence
1110 bp (1016 high quality bases) assembled on 2011-12-09
> FMO11321.5prime
CAGTCGACATGTGCAGAGCTTGGGTTGTTTTATTCGCTTGGATGCTGACG
GCGGGACGAGGATCGGCCCGCCTTTTGGACGAGGATTGTGGAGTTCCGAT
GCAATTAATACCGAAGATTGTAGGTGGAGTGGATGCGGGGGAACTGAAGA
ATCCGTGGATGGCCCTCATAAAAACCAATGACGAATTTATCTGCGGAGGA
TCGGTAATTACTAACAAATTCGTCTTGACGGCCGCTCATTGTATGTGCAC
CGATGAGGAATGCATTGTAAAGTACACTCAGCTCACAGTTACCTTGGGTG
TGTACCATCTACTGGCGACGGGTGAACACAATCATCCCCACGAGATATAC
AACGTGGAGAGGGTCTACATCCACGATTCCTTCGCGATACAAAACTATCG
CAATGACATAGCGCTTCTTAGGTTGCAAAAAAGTATCGTTTACAAGCCAC
AAATCAAACCGTTATGTATTTTACTGAACGACCAACTCAAGCCGCAAACG
GATCTCATCCAGGAGTTCACAGCAATCGGCTGGGGCGTAACGGGCAATGG
GAAGATGAGTAACAATCTTCAAATGGTCAAGATCTACAGAATAGATAGGA
AAATGTGCGAGGCAGCATTTTGGTACACTTTTGATTACCCAATGTTCTGT
GCCGGCACCGCGGTAGGCAGAGATACCTGCAAAAGGGACTCCGGTGGACC
CTTGTACATACATATGTTGTTCGATGGCATCAAGCGAGCAACGCAGTTGG
GAATCGTCAGCACTGGCACCGAAGATTGCAGAGGTTTCGGTATGTACACC
GATGTAATGGGCCATATCGACTTTATCGAGCGCATTGTTCTGGATGCGGA
CATTGAGGTGGTGCTACCCTATATAGACCTACTCGATGCTGGGTGTCTGG
GCCAACGACACGTTGACAGCTGGGAAAGAAGTGGTCCCGATGCGATCAGT
CCTAGCGAGTGTTGCTGAGTCTACAGATTCATTTATAATCTCAACGCGCC
CCTATTTTCGAAAACTTTCGTGTGACACGCGCAAATTGATTTCCGAAGGT
ACGCCATTAAAGTTCACCTGGCACAGGCGATGTGGCAACCTTACCCGGTC
CATCGATTCA
FMO11321.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30091-RA | 1681 | CG30091-RA | 27..1112 | 9..1084 | 4860 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15680906..15681571 | 284..949 | 3220 | 99.6 | Plus |
| 2R | 25286936 | 2R | 15680571..15680845 | 9..283 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:37:18 has no hits.
FMO11321.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:42 Download gff for
FMO11321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30091-RA | 1..1088 | 9..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:05 Download gff for
FMO11321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30091-RA | 19..1114 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:30 Download gff for
FMO11321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30091-RA | 19..1114 | 1..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:30 Download gff for
FMO11321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15680563..15680845 | 1..283 | 98 | -> | Plus |
| 2R | 15680906..15681642 | 284..1014 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:05 Download gff for
FMO11321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11568068..11568350 | 1..283 | 98 | -> | Plus |
| arm_2R | 11568411..11569147 | 284..1014 | 97 | -> | Plus |
