FMO11323.5prime Sequence
1130 bp (1010 high quality bases) assembled on 2011-12-09
> FMO11323.5prime
CAGTCGACATGGATCGCCTTTCCATTCTGCTCTTGGTTCTTGGATTCTCC
CGGATCCAGGCTCTTTTCTGTGGTGGGTCAATGGCGAAAGAGTGCGTACA
GCGAAACCGTTGCCGTATTGGTACCGAAACGGGAAGACCAATCATAGATT
TTAGAGGACTTAATAACGGTAATCAGGGATGTGAATCTGGCCAAACCTGC
TGCCCGAAAACGGAAATATTACAATATCCAGTACAGGCTGACAATCAACC
GCTACCTACTGAATGTGGCCACGTGAACCGTATAGGAGTGGGCTTCACCA
TAACTAACGCGAGAGACATCGCACAGAAAGGCGAACTGCCATGGATGGTG
GCCCTGCTCGATTCCAGAAGCCGTCTACCGTTAGGCGGCGGCTCCCTAAT
TACGCGGGATGTGGTGCTTACATCATCTACGAAAACTTTGGAAGTTCCTG
TTTTATATCTTATTGTGAGGGCTGGCGAATGGGACTTTGAAAGCATCACC
GAGGAGCGAGCACATGAGGACGTTGCGATCAGGAAGATCGTACGACATAC
CAATCTCAGTGTCGAAAATGGTGCCAATAATGCGGCCCTTCTGTTCCTCG
CTAGACCGCTAAAACTAGACCATCACATAGGTCTCATTTGTTTGCCGCCG
CCGAATCGAAACTTTATCCATAATCGCTGCATCGTCAGTGGCTGGGGCAA
AAAAACAGCCTTGGACAACAGTTACATGAATATCCTGAAAAAGATCGAGT
TGCCATTGGTGGACAGATCTGTGTGTCAAACGAAACTGCAAGGACCCTAC
GGCAAAGACTTCATTCTCGATAACAGCCTAATATGTGCCGGCGGAGAACC
TGGCAAGGATACGTGCAAAGGCGATGGAGTGCCCCACTTGCCTGCCCACT
GCAAGCGATCCTAACCGGTACGAACTGTTGGAATCGTAAACTTTGGATTC
GATGTGGAGGGCCACTTCCTGCTGCCTACACTGATGTTTCCAAATTCGAA
GCTGGAATTGATATTGTATCCAAGCGAGCAGTACACTATGTCCTCTCTCA
GTTGGGAATAATTAGCCATCACCTTGCCTCCCACTCGATCGCTATATACC
AAAATATATAGGGCCTAAAAACCTCAAAAA
FMO11323.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4793-RD | 2832 | CG4793-RD | 16..1133 | 9..1129 | 4990 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15923681..15924493 | 219..1026 | 3680 | 98.3 | Plus |
| 2L | 23513712 | 2L | 15923410..15923619 | 9..218 | 1050 | 100 | Plus |
| 2L | 23513712 | 2L | 15837072..15837133 | 697..636 | 205 | 88.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:37:34 has no hits.
FMO11323.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:44 Download gff for
FMO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4793-RD | 14..1127 | 6..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:15 Download gff for
FMO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4793-RD | 14..1127 | 6..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:37 Download gff for
FMO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4793-RD | 14..1127 | 6..1122 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:37 Download gff for
FMO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15923408..15923619 | 6..218 | 99 | -> | Plus |
| 2L | 15923681..15924582 | 219..1122 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:15 Download gff for
FMO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15923408..15923619 | 6..218 | 99 | -> | Plus |
| arm_2L | 15923681..15924582 | 219..1122 | 96 | | Plus |
