FMO11326.5prime Sequence
1121 bp (1011 high quality bases) assembled on 2011-12-09
> FMO11326.5prime
CAGTCGACATGGAGCCAAATCATTATTACTGCCGGAGCGCCATGCAGCAG
AATCCCTCGACTTCCATTCCCCAACATGCGTCGAACAAACTCAACTATGG
GATGAACGCTGGCCAGGATTATGTGACATGTAGCTCCGGCCAATCGCAAT
CGGGCTACAGCTCCAAGGACTTGGTTCCGCGCAGTGGGAACAGCAAAACG
CTCGGCGGGAATGGCAACATGGGGAGTCCGTACGGAGGATCTGTGTGCAG
CAACAGTGGCCAATGCAGCAAGAATACTGCCAACGCTGGGAACTATATCA
ACATAATGACTGTTCCACTGGGAACACTGCAGTATAATCGAAAAAAGCTA
TCTACACAAGACTACGAATCGCATTTATATTACAACACTACGGATGTGAA
GTGTCGCGATGATTACTATATAGCCAACAATGCCGCAGCAGCAATACCGC
AGCACCAAGCTCATCAACCGCATCAGCAGCCGCATCAGCACCAACATCCG
CAGCATCAGCAGCAGCATCAGCAACACCAGCAACACCAACAGCACCAGCA
ACATCAGCAACATCTGCACCAGCAGCAGCAGCAACAGGCAAACTTTCTCC
ACATCCAACAATCGCTACAACACAACCACCAATTGAGCCACCCAGAACCA
ATCCATCAGTTGCCCCAATTACAGGGCACGGTGGCCGATCCACCAGATGC
CTTCGACAACTGTGCGATCTTCCCGAGCGCCGGCGGCAGCAGCAACGGAA
GTGGACGCGTGGCAGCCACTCAAACCCATCAGAACCCATCCGGTGTGGTC
ACGTGCGACCAGCAGTACCCGTGTCCCTGGGCTCGGTGAATATGCCCGTT
CCCCCAATCATGTATACCGTGCATCGTGTGGTGACCACAGCTCAGATCCA
AACGGCAGCGGGCAGCACCTTCGCCTCGTCGGCTAGTGTGTCCAGTGTGT
CAGCACTGGCCAGAATGATGGTGACTGCCTGTCGCCGGCACAGTGTCCTC
CGCATGGCCGCCTCTGGAATGCTTCTGTCTGGGTGGATTACCGAACATGG
GGCGCCAACATGATGAAGCATGCAAGGTGCACTTGTCCCATTCGACTGGA
GAGAGCCCATCGAGATGCTCA
FMO11326.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bili-RH | 4154 | CG11848-RH | 613..1723 | 7..1111 | 5160 | 98.3 | Plus |
| Bili-RG | 3901 | CG11848-RG | 360..1470 | 7..1111 | 5160 | 98.3 | Plus |
| Bili-RF | 3781 | CG11848-RF | 240..1350 | 7..1111 | 5160 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25133016..25133729 | 368..1076 | 3150 | 98.3 | Plus |
| Y | 3667352 | Y | 3050664..3051216 | 507..1063 | 2020 | 94 | Plus |
| 3R | 32079331 | 3R | 25132593..25132953 | 7..367 | 1805 | 100 | Plus |
| Y | 3667352 | Y | 3050518..3050664 | 172..318 | 630 | 95.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:37:58 has no hits.
FMO11326.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 10:04:46 Download gff for
FMO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bili-RD | 187..1283 | 1..1092 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:33 Download gff for
FMO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bili-RE | 298..1394 | 1..1092 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:48 Download gff for
FMO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bili-RF | 234..1330 | 1..1092 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:48 Download gff for
FMO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25132589..25132953 | 1..367 | 98 | -> | Plus |
| 3R | 25133016..25133742 | 368..1090 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:33 Download gff for
FMO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20958311..20958675 | 1..367 | 98 | -> | Plus |
| arm_3R | 20958738..20959464 | 368..1090 | 98 | <- | Plus |
